1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TCCTGTTACAAGCGTTAGCTGGGCTCCTGATGGTCGGCACATGGCCGTCGGGCTCAACTCGTCTGACGTCCAGCTCTGGGACACCAGCTCCAACCGACTGgtacgcacattgtgatgtttcatctaaaaattccagtgcaggttatctgttgctgaattaaatcgtttcatcctatgcag
species | Zea mays |
transcript | GRMZM2G063192_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GGCTCAACTCGTCTGACGTCCAGCTCTGGGACACCAGCTCCAACCGACTG TTGAGAACACTCAGAGGTGCGCATGAGGCAAGGGTAGGCTCGCTGGCATGGEST: gi|60394948|gb|DN227817.1|DN227817
genomic: GGCTCAACTCGTCTGACGTCCAGCTCTGGGACACCAGCTCCAACCGACTGgtacgcacat ... tcctatgcagTTGAGAACACTCAGAGGTGCGCATGAGGCAAGGGTAGGCTCGCTGGCATGG
EST: GGCTCAACTCGTCTGACGTCCAGCTCTGGGACACCAGCTCCAACCGACTG TTGAGAACACTCAGAGGEST: gi|67016442|gb|CO445191.1|CO445191
genomic: GGCTCAACTCGTCTGACGTCCAGCTCTGGGACACCAGCTCCAACCGACTGgtacgcacat ... tcctatgcagTTGAGAACACTCAGAGG
EST: GGCTCAACTCGTCTGACGTCCAGCTCTGGGACACCAGCTCCAACCGACTG TTGAGAACACTCAGAGGTGCGCATGAGGCAAGGGTAGGCTCGCTGGCATGG
genomic: GGCTCAACTCGTCTGACGTCCAGCTCTGGGACACCAGCTCCAACCGACTGgtacgcacat ... tcctatgcagTTGAGAACACTCAGAGGTGCGCATGAGGCAAGGGTAGGCTCGCTGGCATGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCCTGTTACAAGCGTTAGCTGGGCTCCTGATGGTCGGCACATGGCCGTCGGGCTCAACTCGTCTGACGTCCAGCTCTGGGACACCAGCTCCAACCGACTGgtacgcacattgtgatgtttcatctaaaaattccagtgcaggttatctgttgctgaattaaatcgtttcatcctatgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC