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TCGTAAATTAAGGTTTTTTAAGGAGCAGATGTCAAAAGCTGACATAACAGCCTCTCCTACACAACTAAATGGAACTCATATGGATTTTGATGAATTGGAGgtatgttagtcaatgtgatgctccttgatcatggataataaatcttgacttgctgttttaaacactgcctaataacag
species | Zea mays |
transcript | GRMZM2G058910_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CCTCTCCTACACAACTAAATGGAACTCATATGGATTTTGATGAATTGGAG ATAAAGCTTGGAGAACTGGAAGCTGAGCTAACTGAAGEST: gi|211511210|gb|FL158323.1|FL158323
genomic: CCTCTCCTACACAACTAAATGGAACTCATATGGATTTTGATGAATTGGAGgtatgttagt ... ctaataacagATAAAGCTTGGAGAACTGGAAGCTGAGCTAACTGAAG
EST: CCTCTCCTACACAACTAAATGGAACTCATATGGATTTTGATGAATTGGAG ATAAAAGCTTGGAGAACTGGEST: gi|211188745|gb|FL459412.1|FL459412
genomic: CCTCTCCTACACAACTAAATGGAACTCATATGGATTTTGATGAATTGGAGgtatgttagt ... ctaataacagATAAA-GCTTGGAGAACTGG
EST: CCTCTCCTACACAACTAAATGGAACTCATATGGATTTTGATGAATTGGAG ATAAAGCTTGGAGAACTGGAAGCTGAGCTAACTGAAGTTAATGCAAACAAT
genomic: CCTCTCCTACACAACTAAATGGAACTCATATGGATTTTGATGAATTGGAGgtatgttagt ... ctaataacagATAAAGCTTGGAGAACTGGAAGCTGAGCTAACTGAAGTTAATGCAAACAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCGTAAATTAAGGTTTTTTAAGGAGCAGATGTCAAAAGCTGACATAACAGCCTCTCCTACACAACTAAATGGAACTCATATGGATTTTGATGAATTGGAGgtatgttagtcaatgtgatgctccttgatcatggataataaatcttgacttgctgttttaaacactgcctaataacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG