1 5' 3' | 2 5' 3' | 3 5' 3' |
CGTCCGCGGCCTGCAGGTCCGCCGCGCCGCCGCCGACGACTGGGTCACCGTGCAGCCCGTCCGCGACGCCTTCATCGTCAACGTCGGCGACCAAGTCCAGgtatattatattatattataaccacaccaattaataccatcgcgaggatgatgacccgcgctatcagagagccaataattaaaagctcaacatatagaag...
species | Zea mays |
transcript | GRMZM2G058024_T02 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGCAGCCCGTCCGCGACGCCTTCATCGTCAACGTCGGCGACCAAGTCCAG ATACTGAGCAACTCCGTGTACAAGAGCGTGGAGCACCGGGTGGTCGTGAACEST: gi|148999653|gb|EE036641.2|EE036641
genomic: TGCAGCCCGTCCGCGACGCCTTCATCGTCAACGTCGGCGACCAAGTCCAGgtatattata ... ccgacgacagATACTGAGCAACTCCGTGTACAAGAGCGTGGAGCACCGGGTGGTCGTGAAC
EST: TGCAGCCCGTCCGCGACGCCTTCATCGTCAACGTCGGCGACCAAGTCCAG ATACTGAGCAACTCCGTGTACAAGAGCGTGGAGCACCGGGTGGTCGTGAACEST: gi|211317949|gb|FL318712.1|FL318712
genomic: TGCAGCCCGTCCGCGACGCCTTCATCGTCAACGTCGGCGACCAAGTCCAGgtatattata ... ccgacgacagATACTGAGCAACTCCGTGTACAAGAGCGTGGAGCACCGGGTGGTCGTGAAC
EST: TGCAGCCCGTCCGCGACGCCTTCATCGTCAACGTCGGCGACCAAGTCCAG ATACTGAGCAACTCCGTGTACAAGAGCGTGGAGCACCGGGTGGTCGTGAACEST: gi|101394611|gb|EB819240.1|EB819240
genomic: TGCAGCCCGTCCGCGACGCCTTCATCGTCAACGTCGGCGACCAAGTCCAGgtatattata ... ccgacgacagATACTGAGCAACTCCGTGTACAAGAGCGTGGAGCACCGGGTGGTCGTGAAC
EST: TGCAGCCCGTCCGCGACGCCTTCATCGTCAACGTCGGCGACCAAGTCCAG ATACTGAGCAACTCCGTGTACAAGAGCGTGGAGCACCGGGTGGTCGTGAAC
genomic: TGCAGCCCGTCCGCGACGCCTTCATCGTCAACGTCGGCGACCAAGTCCAGgtatattata ... ccgacgacagATACTGAGCAACTCCGTGTACAAGAGCGTGGAGCACCGGGTGGTCGTGAAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGTCCGCGGCCTGCAGGTCCGCCGCGCCGCCGCCGACGACTGGGTCACCGTGCAGCCCGTCCGCGACGCCTTCATCGTCAACGTCGGCGACCAAGTCCAGgtatattatattatattataaccacaccaattaataccatcgcgaggatgatgacccgcgctatcagagagccaataattaaaagctcaacatatagaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cccgcgc