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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCTGAAGTTGTTCTGCGACAAGGACTACCCTGAGAAGCCACCATCAGTTCGATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctcttcatgtctttgtggttgtggttggtgcagaatactagtttcaggtttgatatttgggataccttctctgattttgctatatctattttggttgag

Basic information

species Zea mays
transcript GRMZM2G056501_T05
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G056501_T05 (Zea mays), 5'ss of exon 3
lower sequence: LOC_Os09g12570.1 (Oryza sativa), 5'ss of exon 3
GCTGAAGTTGTTCTGCGACAAGGACTACCCTGAGAAGCCACCATCAGTTCGATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctcttcatgtctttgtggttgtggttggtgcagaatactagtttcaggtttgatatttgggataccttctctgattttgctatatctattttggttgag
||||||| ||||||| |||||||||||||| |||||||||||||| || || |||||||||||||| ||  |  | || ||||||||||| ||||||| ||||  |||| |      |      ||| | ||    ||  || |  |||   |   | || |     |   |  | |   |||| |      ||  |  | |  
GCTGAAGCTGTTCTGTGACAAGGACTACCCAGAGAAGCCACCATCTGTCCGGTTTCATTCAAGAATCAATATGTCGTGTGTTAATCATGAGACTGGAGCGgtattctctcc------tcccaaatgtagatgcca-agtttatttattttgtgcaggctactccctctgattgatattcatttggtgctgtgatccta-tag--

upper sequence: GRMZM2G056501_T05 (Zea mays), 5'ss of exon 3
lower sequence: PP1S490_20V6.1 (Physcomitrella patens), 5'ss of exon 4
GCTGAAGTTGTTCTGCGACAAGGACTACCCTGAGAAGCCACCATCAGTTCGATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctcttcatgtctttgtggttgtggttggtgcagaatactagtttcag-gtttgatatttgggataccttctctgattttgctatatctattttggttgag------------------------
  ||||  |||||||||||||||||||||| || ||||||||| | ||| |||| |||||  | || ||| | ||    || ||    || || ||| |||||||| |  |||||   ||| || |   ||| |||        |   || |  || | | |   |   | ||  |||| |         | ||    |    |                         
ATTGAAACTGTTCTGCGACAAGGACTACCCCGATAAGCCACCAACTGTTAGATTCCATTCTCGGATCAACATGACTCATGTGAACTCGGAGACGGGATTGgtaaccac--catgttcatgttgtggct-ttgatgctcttcttcaccgtctgtattcgctctcctgttcagctagtctgctggcaaccagtgtaagaagagctaactgtcagtatcatgcatttcgtag
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|38229714|gb|CF920027.1|CF920027
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|31628008|gb|CD526398.1|CD526398
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|60398352|gb|DN231168.1|DN231168
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|38229677|gb|CF919990.1|CF919990
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32866733|gb|CF006415.1|CF006415
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|47962651|gb|CN845360.1|CN845360
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32866844|gb|CF006526.1|CF006526
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32915000|gb|CF019812.1|CF019812
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32859312|gb|CD998993.1|CD998993
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|50335604|gb|CO530730.1|CO530730
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|211476807|gb|FL410821.1|FL410821
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|211189279|gb|FL377638.1|FL377638
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|37384211|gb|CF629163.1|CF629163
EST:     GATTTCTTTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|40485676|gb|CK394684.1|CK394684
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32860146|gb|CD999827.1|CD999827
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|18649355|gb|BM498174.1|BM498174
EST:     ATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: ATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|24767879|gb|CA403014.1|CA403014
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|60340923|gb|DN207896.1|DN207896
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|42491923|gb|CK700969.1|CK700969
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|67013798|gb|CO442547.1|CO442547
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32914979|gb|CF019791.1|CF019791
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|9732087|gb|BE510839.1|BE510839
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|9733129|gb|BE511881.1|BE511881
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|60344371|gb|DN211344.1|DN211344
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|211408721|gb|FL421599.1|FL421599
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCAAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|18163692|gb|BM333531.1|BM333531
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|60354070|gb|DN221043.1|DN221043
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|74035131|gb|DT535621.1|DT535621
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|211211952|gb|FL383449.1|FL383449
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|45568582|gb|CK986134.1|CK986134
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|47961820|gb|CN844529.1|CN844529
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|60347639|gb|DN214612.1|DN214612
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|60345663|gb|DN212636.1|DN212636
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|60358001|gb|DN224974.1|DN224974
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|47961644|gb|CN844353.1|CN844353
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|33770654|gb|CF272948.1|CF272948
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|93014293|gb|EB639813.1|EB639813
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|16925862|gb|BM078930.1|BM078930
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|211360583|gb|FL386218.1|FL386218
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGGTAACTGGCAGCG
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGG-TAACTGGCAGCG
EST: gi|61236918|gb|DN586623.1|DN586623
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|71773637|gb|DR971535.1|DR971535
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|29130750|gb|CB381454.1|CB381454
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|211456445|gb|FL398519.1|FL398519
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32907866|gb|CF012679.1|CF012679
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|84980080|gb|DW530429.1|DW530429
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|148937458|gb|EC881639.2|EC881639
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|60672694|gb|DN475388.1|DN475388
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|86472784|gb|DY239154.1|DY239154
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32936724|gb|CF041543.1|CF041543
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|33285502|gb|CF075297.1|CF075297
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|211434280|gb|FL405881.1|FL405881
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|37361201|gb|CF602490.1|CF602490
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32866845|gb|CF006527.1|CF006527
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32937562|gb|CF042381.1|CF042381
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|211074029|gb|FL399400.1|FL399400
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|30591607|gb|CD052457.1|CD052457
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|113704186|gb|EE681690.1|EE681690
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|30591554|gb|CD052432.1|CD052432
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|87153581|gb|DY398370.1|DY398370
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|67029235|gb|CO457984.1|CO457984
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|84981004|gb|DW531353.1|DW531353
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|211339579|gb|FL426271.1|FL426271
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32863217|gb|CF002899.1|CF002899
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|5525237|gb|AI861235.1|AI861235
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32916382|gb|CF021194.1|CF021194
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|47962719|gb|CN845428.1|CN845428
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|211439206|gb|FL392589.1|FL392589
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32860147|gb|CD999828.1|CD999828
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32856101|gb|CD995782.1|CD995782
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|60355402|gb|DN222375.1|DN222375
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|211277146|gb|FL403157.1|FL403157
EST:     ATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: ATTTCATTCAAGAATAAACTTAACATGCGTTAATCATG-AAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|71773638|gb|DR971536.1|DR971536
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32866732|gb|CF006414.1|CF006414
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|211289852|gb|FL370555.1|FL370555
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|211400406|gb|FL382673.1|FL382673
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|211024530|gb|FL377475.1|FL377475
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCAAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|18180144|gb|BM381354.1|BM381354
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32863816|gb|CF003498.1|CF003498
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32914840|gb|CF019652.1|CF019652
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32858315|gb|CD997996.1|CD997996
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|16927227|gb|BM080296.1|BM080296
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|86856119|gb|DY307130.1|DY307130
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|211156234|gb|FL370458.1|FL370458
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32837666|gb|CD977344.1|CD977344
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|60355833|gb|DN222806.1|DN222806
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32913623|gb|CF018435.1|CF018435
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|30591510|gb|CD052409.1|CD052409
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32916451|gb|CF021263.1|CF021263
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|31349736|gb|CD434093.1|CD434093
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32913092|gb|CF017904.1|CF017904
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|5005803|gb|AI711865.1|AI711865
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|14244972|gb|BG842910.2|BG842910
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAAC-----TG                         G--A-GT-GGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|31250336|gb|CD219360.1|CD219360
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|9733322|gb|BE512074.1|BE512074
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GT--TG-A------CCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
EST: gi|32907867|gb|CF012680.1|CF012680
EST:     GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTG                         GTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT
genomic: GATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 3 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 53

GCTGAAGTTGTTCTGCGACAAGGACTACCCTGAGAAGCCACCATCAGTTCGATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGTGATTACTCAATGGAATACATCCTAACCCATCTCAAGAAAGAGATGACAT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 27

GCTGAAGTTGTTCTGCGACAAGGACTACCCTGAGAAGCCACCATCAGTTCGATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGTGATTACTCAATGGAATACATCCTAACCCATCTCAAGAAAGAGATGACAT


Block sizes: 49 (upstream exon), 46 (downstream exon)
Score: 31

GCTGAAGTTGTTCTGCGACAAGGACTACCCTGAGAAGCCACCATCAGTTCGATTTCATTCAAGAATAAACTTAACATGCGTTAATCATGAAACTGGAGTGgtaacctctt ... tttggttgagGTCATGTAGGTTGACCCGAAGAAGTTCAGCGTTCTGGGTAACTGGCAGCGTGATTACTCAATGGAATACATCCTAACCCATCTCAAGAAAGAGATGACAT