1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GTCTGGCTCTGTATGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTGgtgagatactctcttctcttccattgatgctatgagctcttatcttatataatctataatctgagctagatctttttccacattcctcttttgcag
species | Zea mays |
transcript | GRMZM2G053764_T05 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGGCTCTGTATGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTG ATCTAGTAAATGTTTTTGAAGTATTCCTTCCACAGCTGTTACTATATCCAAEST: gi|60396538|gb|DN229407.1|DN229407
genomic: TGGCTCTGTATGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTGgtgagatact ... tcttttgcagATCTAGTAAATGTTTTTGAAGTATTCCTTCCACAGCTGTTACTATATCCAA
EST: TGGCTCTGTATGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTG ATCTAGTAAATGTTTTTGAAGTATTCCTTCCACAGCTGTTACTATATCCAAEST: gi|1337735|gb|W49441.1|W49441
genomic: TGGCTCTGTATGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTGgtgagatact ... tcttttgcagATCTAGTAAATGTTTTTGAAGTATTCCTTCCACAGCTGTTACTATATCCAA
EST: TGGCTCTGTATGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTG ATCTAGTAAATGTTTTTGAAGTATTCCTTCCACAGCTGTTACTATATCCAAEST: gi|5608383|gb|AI901960.1|AI901960
genomic: TGGCTCTGTATGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTGgtgagatact ... tcttttgcagATCTAGTAAATGTTTTTGAAGTATTCCTTCCACAGCTGTTACTATATCCAA
EST: TGGCTCTGTCTGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTG ATCTAGTAAATGTTTTTGAAGTATTCCTTCCACAGCTGTTACTATATCCAAEST: gi|87156694|gb|DY401483.1|DY401483
genomic: TGGCTCTGTATGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTGgtgagatact ... tcttttgcagATCTAGTAAATGTTTTTGAAGTATTCCTTCCACAGCTGTTACTATATCCAA
EST: TGGCTCTGTCTGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTG ATCTAGTAAATGTTTTTGAAGTATTCCTTCCACAGCTGTTACTATATCCAA
genomic: TGGCTCTGTATGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTGgtgagatact ... tcttttgcagATCTAGTAAATGTTTTTGAAGTATTCCTTCCACAGCTGTTACTATATCCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCTGGCTCTGTATGTTTAGATGTCATAAACCAAACATGGAGCCCAATGTTTGgtgagatactctcttctcttccattgatgctatgagctcttatcttatataatctataatctgagctagatctttttccacattcctcttttgcag
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