1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TGGGGCAGTTTATCATGGTAAATGGAGAGGATGTGATGTCGCTGTTAAAAGAATAAAAGCGAGTTGCTTTGTAGGAAGACCATCTGAGAGAGAGCGTTTGgtatgtctaattttcttgtcagttccatctattttaggttttgtgcttgcagatgtttgcactgacattacagtactggttcctcaaagtccttcacatt...
species | Zea mays |
transcript | GRMZM2G052658_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GAATAAAAGCGAGTTGCTTTGTAGGAAGACCATCTGAGAGAGAGCGTTTG ATTGCGGATTTCTGGAAAGAAGCTCTGATCCTAAGCTCACTCCATCATCCAEST: gi|211480678|gb|FL225295.1|FL225295
genomic: GAATAAAAGCGAGTTGCTTTGTAGGAAGACCATCTGAGAGAGAGCGTTTGgtatgtctaa ... aattttgcagATTGCGGATTTCTGGAAAGAAGCTCTGATCCTAAGCTCACTCCATCATCCA
EST: GAATAAAAGCGAGTTGCTTTGTWGGAAGACCATCTGAGAGAGAGCGTTTG ATTGCGGATTTCTGGAAAGAAGCTCTGATCCTAAGCTCACTCCATCATCCAEST: gi|74237122|gb|DT645036.1|DT645036
genomic: GAATAAAAGCGAGTTGCTTTGTAGGAAGACCATCTGAGAGAGAGCGTTTGgtatgtctaa ... aattttgcagATTGCGGATTTCTGGAAAGAAGCTCTGATCCTAAGCTCACTCCATCATCCA
EST: GAATAAAAGCGAGTTGCTTTGTAGGAAGACCATCTGAGAGAGAGCGTTTG ATTGCGGATTTCTGGAAAGAAGCTCTGATCCTAAGCTCACTCCATCATCCAEST: gi|211480677|gb|FL225294.1|FL225294
genomic: GAATAAAAGCGAGTTGCTTTGTAGGAAGACCATCTGAGAGAGAGCGTTTGgtatgtctaa ... aattttgcagATTGCGGATTTCTGGAAAGAAGCTCTGATCCTAAGCTCACTCCATCATCCA
EST: GAATAAAAGCGAGTTGCTTTGTAGGAAGACCATCTGAGAGAGAGCGTTTG ATTGCGGATTTCTGGAAAGAAGCTCTGATCCTAAGCTCACTCCATCATCCA
genomic: GAATAAAAGCGAGTTGCTTTGTAGGAAGACCATCTGAGAGAGAGCGTTTGgtatgtctaa ... aattttgcagATTGCGGATTTCTGGAAAGAAGCTCTGATCCTAAGCTCACTCCATCATCCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGGGCAGTTTATCATGGTAAATGGAGAGGATGTGATGTCGCTGTTAAAAGAATAAAAGCGAGTTGCTTTGTAGGAAGACCATCTGAGAGAGAGCGTTTGgtatgtctaattttcttgtcagttccatctattttaggttttgtgcttgcagatgtttgcactgacattacagtactggttcctcaaagtccttcacatt
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