1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ATAATGGAAACTTGGAGCAATGGCTCCATGGGGATGTTGGCCCTGTGAGCCCTCTTACATGGGATATCAGAATGAAGATTATTCTGGGAACAGCAAAAGGgtatgcactttgctgacttattactgtagtcttgtttttttgctgtcactatctgcttacattattttacctaattgtgaag
species | Zea mays |
transcript | GRMZM2G050861_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CCTCTTACATGGGATATCAGAATGAAGATTATTCTGGGAACAGCAAAAGG GTTAATGTATTTGCACGAGGGACTTGAGCCAAAGGTTGTTCACCGTGATGTEST: gi|28931348|gb|CB334709.1|CB334709
genomic: CCTCTTACATGGGATATCAGAATGAAGATTATTCTGGGAACAGCAAAAGGgtatgcactt ... aattgtgaagGTTAATGTATTTGCACGAGGGACTTGAGCCAAAGGTTGTTCACCGTGATGT
EST: CCTCTTACATGGGATATCAGAATGAAGATTATTCTGGGAACAGCAAAAGG GTTAATGTATTTGCACGAGGGACTTGAGCCAAAGGTTGTTCACCGTGATGTEST: gi|5555472|gb|AI881423.1|AI881423
genomic: CCTCTTACATGGGATATCAGAATGAAGATTATTCTGGGAACAGCAAAAGGgtatgcactt ... aattgtgaagGTTAATGTATTTGCACGAGGGACTTGAGCCAAAGGTTGTTCACCGTGATGT
EST: CCTCTTACATGGGATATCAGAATGAAGATTATTCTGGGAACAGCAAAAGG TTTAATGTATTTGCACGAGGGACTTGAGCCAAAGGTTGTTCACCGTGATGTEST: gi|67010388|gb|CO439137.1|CO439137
genomic: CCTCTTACATGGGATATCAGAATGAAGATTATTCTGGGAACAGCAAAAGGgtatgcactt ... aattgtgaagGTTAATGTATTTGCACGAGGGACTTGAGCCAAAGGTTGTTCACCGTGATGT
EST: CCTCTTACATGGGATATCAGAATGAAGATTATTCTGGGAACAGCAAAAGG GTTAATGTATTTGCACGAGGGACTTGAGCCAAAGGTTGTTCACCGTGATGT
genomic: CCTCTTACATGGGATATCAGAATGAAGATTATTCTGGGAACAGCAAAAGGgtatgcactt ... aattgtgaagGTTAATGTATTTGCACGAGGGACTTGAGCCAAAGGTTGTTCACCGTGATGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATAATGGAAACTTGGAGCAATGGCTCCATGGGGATGTTGGCCCTGTGAGCCCTCTTACATGGGATATCAGAATGAAGATTATTCTGGGAACAGCAAAAGGgtatgcactttgctgacttattactgtagtcttgtttttttgctgtcactatctgcttacattattttacctaattgtgaag
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