1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CAAATCTTGTTGAACTGATTGGCTATTGCTGTGAGGGTTCACATAGACTGCTTGTGTATGAGTACATGGCTTGTGGAAGCCTCGAAAAGCACCTTTTTCGgcgtaagctctaaccggctatttgcactacctctttaacattcaccgttccgtaggggtgtaccatttttgccttcggacaaatctgttaggaaggaaat...
species | Zea mays |
transcript | GRMZM2G050701_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CTTGTGTATGAGTACATGGCTTGTGGAAGCCTCGAAAAGCACCTTTTTCG GGGTTTGCCTTAATATGCCATGGTCAACACGCATGAAGATTGCATTGGGTGEST: gi|71436828|gb|DR817878.1|DR817878
genomic: CTTGTGTATGAGTACATGGCTTGTGGAAGCCTCGAAAAGCACCTTTTTCGgcgtaagctc ... aacattgcagGGGTTTGCCTTAATATGCCATGGTCAACACGCATGAAGATTGCATTGGGTG
EST: CTTGTGTATGAGTACATGGCTTGTGGAAGCCTCGAAAAGCACCTTTTTCG GGGTTTGCCTTAATATGCCATGGTCAACACGCATGAAGATTGCATTGGGTG
genomic: CTTGTGTATGAGTACATGGCTTGTGGAAGCCTCGAAAAGCACCTTTTTCGgcgtaagctc ... aacattgcagGGGTTTGCCTTAATATGCCATGGTCAACACGCATGAAGATTGCATTGGGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAAATCTTGTTGAACTGATTGGCTATTGCTGTGAGGGTTCACATAGACTGCTTGTGTATGAGTACATGGCTTGTGGAAGCCTCGAAAAGCACCTTTTTCGgcgtaagctctaaccggctatttgcactacctctttaacattcaccgttccgtaggggtgtaccatttttgccttcggacaaatctgttaggaaggaaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaggaaa