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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAAGGAACTGCCGTGCAACATATACAGAATATATAATATCAATAAATTCTGGTGATACATCTAGGTGTACAAGTAACAACACATACATTGGGAAATTAAGgtactgctgcactggcttcaatgaacattgttttattttcagaattgacagtattttaatctgacatatgttgttgccttttggacttcag

Basic information

species Zea mays
transcript GRMZM2G046816_T02
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|76923650|gb|DV169591.1|DV169591
EST:     GGTGATACATCTAGGTGTACAAGTAACAACACATACATTGGGAAATTAAG                         GTCAAATTTCCTTGGCACAAAATTTGTAATATACGATACTCATCCGCCATA
genomic: GGTGATACATCTAGGTGTACAAGTAACAACACATACATTGGGAAATTAAGgtactgctgc ... tggacttcagGTCAAATTTCCTTGGCACAAAATTTGTAATATACGATACTCATCCGCCATA
EST: gi|31355846|gb|CD440203.1|CD440203
EST:     GGTGATACATCTAGGTGTACAAGTAACAACACATACATTGGGAAATTAAG                         GTCAAATTTCCTTGGCACAAAATTTGTAATATACGATACTCATCCGCCATA
genomic: GGTGATACATCTAGGTGTACAAGTAACAACACATACATTGGGAAATTAAGgtactgctgc ... tggacttcagGTCAAATTTCCTTGGCACAAAATTTGTAATATACGATACTCATCCGCCATA
EST: gi|67042292|gb|CO468547.1|CO468547
EST:     GGTGATACATCTAGGTGTACAAGTAACAACACATACATTGGGAAATTAAG                         GTCAAATTTCCTTGGCACAAAATTTGTAATATACGATACTCATCCGCCATA
genomic: GGTGATACATCTAGGTGTACAAGTAACAACACATACATTGGGAAATTAAGgtactgctgc ... tggacttcagGTCAAATTTCCTTGGCACAAAATTTGTAATATACGATACTCATCCGCCATA