1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CACATGTAGAAAATGGAGACATGTGCATTGTACTTAATGCAAAGGATATCAGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTATTGGCATACAGGgttagtaaatcccagcaaaagaagttgtcgatcacattatttttgagattaactttttcttgttatgcatttattgatttatacccaaatag
species | Zea mays |
transcript | GRMZM2G044584_T03 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTATTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|33102772|gb|CF062732.1|CF062732
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTATTGGCATACAGGgttagtaaat ... acccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTATTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|18385121|gb|BM418320.1|BM418320
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTATTGGCATACAGGgttagtaaat ... acccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTATTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|13381725|gb|BG458280.1|BG458280
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTATTGGCATACAGGgttagtaaat ... acccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTATTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|211282462|gb|FL053249.1|FL053249
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTATTGGCATACAGGgttagtaaat ... acccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTATTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|87153153|gb|DY397942.1|DY397942
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTATTGGCATACAGGgttagtaaat ... acccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTATTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGAEST: gi|33095052|gb|CF055046.1|CF055046
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTATTGGCATACAGGgttagtaaat ... acccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
EST: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTATTGGCATACAGG GTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
genomic: AGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTATTGGCATACAGGgttagtaaat ... acccaaatagGTATGTTGGCCATTTGAAGGAAAGGAGGCTCAAGGACCAGATGGAGAAAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CACATGTAGAAAATGGAGACATGTGCATTGTACTTAATGCAAAGGATATCAGTGTTACAGGAAGGAAAATGACAGATAAGATTTACTATTGGCATACAGGgttagtaaatcccagcaaaagaagttgtcgatcacattatttttgagattaactttttcttgttatgcatttattgatttatacccaaatag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA