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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTCACCACTCAATCCACCAACGCCTGTTGGCACATGCCGCTATGACAATTCACTAGgtgaccataacagtctctgtcttggatgttttctgaatttggttatattgctctttgcttagtaatgcttgcagttacttatatccgtccttctgatccttgttcag

Basic information

species Zea mays
transcript GRMZM2G041701_T01
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|101396632|gb|EB820241.1|EB820241
EST:     ACTCAATCCACCAACGCCTGTTGGCACATGCCGCTATGACAATTCACTAG                         GACTTCTGACAAAAAAGTTCATTAACTTGCTT
genomic: ACTCAATCCACCAACGCCTGTTGGCACATGCCGCTATGACAATTCACTAGgtgaccataa ... ccttgttcagGACTTCTGACAAAAAAGTTCATTAACTTGCTT
EST: gi|71427665|gb|DR808715.1|DR808715
EST:     ACTCAATCCACCAACGCCTGTTGGCACATGCCGCTATGACAATTCACTAG                         GACTTCTGACAAAAAAGTTCATTAACTTGCTTAAGCAAGCTCCAGATGGCA
genomic: ACTCAATCCACCAACGCCTGTTGGCACATGCCGCTATGACAATTCACTAGgtgaccataa ... ccttgttcagGACTTCTGACAAAAAAGTTCATTAACTTGCTTAAGCAAGCTCCAGATGGCA