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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATGTTCTTTTAATAGTCTTCAAGTGGCCGGCTATGGCGCCTGTTCTCACAGAAACTGATACTAAAACATCAATTAAGGATCTTACCATCAGgtaaacaaattaccattaaactctctcttcgcacttgaatattggttgtgagatactgatggattttctctgctttggtccatgctttcag

Basic information

species Zea mays
transcript GRMZM2G041642_T03
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|32823302|gb|CD963024.1|CD963024
EST:     GATCTTACCATCAG                         TTCCGATGAGAGGTTTATTGCCGTGAATAGGAGCAGTGGCCCATGCAGAGT
genomic: GATCTTACCATCAGgtaaacaaat ... atgctttcagTTCCGATGAGAGGTTTATTGCCGTGAATAGGAGCAGTGGCCCATGCAGAGT
EST: gi|32794408|gb|CD946644.1|CD946644
EST:     GATCTTACCATCAG                         TTCCGATGAGAGGTTTATTGCCGTGAATAGGAGCAGTGGCCCATGCAGAGT
genomic: GATCTTACCATCAGgtaaacaaat ... atgctttcagTTCCGATGAGAGGTTTATTGCCGTGAATAGGAGCAGTGGCCCATGCAGAGT