1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TTTATCTCAGCTGCGAGCTGTTGTCCTGCATAGTCCTATATTGTCAGGGCTGAGAGTTATGTATCCTGTGAAGCGCACATATTGGTTTGACATCTACAAGgtttgtcgtcatctgttaattgcggcattcaatattgagttatccgcttctatatctcaggtgcctgattttttgttattcaggcgacatgcaattttgt...
species | Zea mays |
transcript | GRMZM2G039214_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGAGAGTTATGTATCCTGTGAAGCGCACATATTGGTTTGACATCTACAAG AATATTGATAAAATCCCTCAAGTTACATGTCCTGTGCEST: gi|149076908|gb|EE165564.2|EE165564
genomic: TGAGAGTTATGTATCCTGTGAAGCGCACATATTGGTTTGACATCTACAAGgtttgtcgtc ... ttgcttctagAATATTGATAAAATCCCTCAAGTTACATGTCCTGTGC
EST: TGAGAGTTATGTATCCTGTGAAGCGCACATATTGGTTTGACATCTACAAG AATATTGATAAAATCCCTCAAGTTACATGTCCTGTGCTCATTATACATEST: gi|211408431|gb|FK952615.1|FK952615
genomic: TGAGAGTTATGTATCCTGTGAAGCGCACATATTGGTTTGACATCTACAAGgtttgtcgtc ... ttgcttctagAATATTGATAAAATCCCTCAAGTTACATGTCCTGTGCTCATTATACAT
EST: ACATCTACAAG AATATTGATAAAATCCCTCAAGTTACATGTCCTGTGCTCATTATACAT
genomic: ACATCTACAAGgtttgtcgtc ... ttgcttctagAATATTGATAAAATCCCTCAAGTTACATGTCCTGTGCTCATTATACAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTATCTCAGCTGCGAGCTGTTGTCCTGCATAGTCCTATATTGTCAGGGCTGAGAGTTATGTATCCTGTGAAGCGCACATATTGGTTTGACATCTACAAGgtttgtcgtcatctgttaattgcggcattcaatattgagttatccgcttctatatctcaggtgcctgattttttgttattcaggcgacatgcaattttgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC