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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTTGCTGAGGAGAGGGCTGGACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaattgagttgagcttaacaagatatcatgagaattttcatccttgtcagtactgatgccacatctggctcttgttactggacaacag

Basic information

species Zea mays
transcript GRMZM2G034794_T01
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G034794_T03 (Zea mays), 5'ss of exon 1
lower sequence: LOC_Os05g19370.1 (Oryza sativa), 5'ss of exon 3
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTTGCTGAGGAGAGGGCTGGACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaattgagttgag--ctta-acaagatatcatgagaattttcatccttgtcagtactgatgccacatctggctcttgttactggacaacag
|||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||  || |||    || |  |||    |||||  ||  | || ||||| |    |    | | || ||     | | | |  ||     |    ||
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCAGTTGCTGAGGAGAGAGCTGGACGCAAGCTGGGTGGACTCAGGGTGCTCAACTCCTACTGGGTGAATGAGgtatatttgatttcactgggatcttgcggaagatggcaaaaaaaatttcagctgctttt-cattaattcc----tttgttttcattggcttaatgtag

upper sequence: GRMZM2G034794_T03 (Zea mays), 5'ss of exon 1
lower sequence: LOC_Os03g40180.1 (Oryza sativa), 5'ss of exon 3
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTTGCTGAGGAGAGGGCTGGACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaattgagttgagcttaacaagatatcatgagaattttcatccttgtcagt-actgatgccacatctggctcttgttactggacaacag
|||||||||||||||||||||||||||||| |||||||||||||| ||||| || ||| | || ||||||||||| |||||||||||||||||||| ||||||   || | |    |||| |     | | || || |  |      |   || |    | | |||    |  ||| | |  ||  |  |   |||
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCAGTTGCTGAGGAGAGAGCTGGGCGCAAGTTGGGCGGACTCAGGGTGCTCAACTCCTACTGGGTGAACGAGgtacatttcactttactgagatctttcaaagatgattatcaacaatgtatctgccttccattaatg----acttggttttctttggtttaatgcag

upper sequence: GRMZM2G034794_T03 (Zea mays), 5'ss of exon 1
lower sequence: GLYMA05G04870.1 (Glycine max), 5'ss of exon 3
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTTGCTGAGGAGAGGGCTGGACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgct-taattgagttgagcttaacaagatatcatgagaattttcatccttgtcagtactgatgccacatctggctcttgttactggacaacag
 || || || || ||| | | ||||||||||||||| |||||| | |||||| | ||| | ||||| |||||||||||||| || |||||||||||||||||||| | |  |||  |||     |   | |  |    |  | || |   || ||  | |||||| | |    |   | ||||||| |        
TCAACTGAAATTTCAGCGCAGCAAGAGGTCTGTTGCCGAGGAGCGAGCTGGAAGGAAGTTGGGTGGCCTCAGGGTTCTCAATTCATACTGGGTGAATGAGgtatgttatctttgcattgttgaaagtgaaacctggatatgaattgctgactggttgg-actgattctattgttatgtgttgttacag--------

upper sequence: GRMZM2G034794_T03 (Zea mays), 5'ss of exon 1
lower sequence: GLYMA01G41620.3 (Glycine max), 5'ss of exon 2
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTTGCTGAGGAGAGGGCTGGACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaattgagttgagcttaacaagatatcatgagaattttcatccttgtca-gtactgatgccacatctggctcttgttactggacaacag
||| || || || ||| | | ||||||||| ||||| |||||| | |||||||| ||||| |||||||| ||||| ||||| || ||||||||||||||||| || |  ||||  ||     |    | ||    ||| |||||   |     ||| ||  ||||     |       ||||| |  |     |||
CCAACTGAAATTTCAGCGAAGCAAGAGGTCAGTTGCCGAGGAGCGAGCTGGACGGAAGCTGGGTGGACTTAGGGTCCTCAATTCTTACTGGGTGAATGAGgtttgtt--attgtattacttctgttgaaat----tga-aatttggttgtgaatcatgtgttgatttggta---aaagcttgtcatggtgtttcag

upper sequence: GRMZM2G034794_T03 (Zea mays), 5'ss of exon 1
lower sequence: GLYMA17G15230.1 (Glycine max), 5'ss of exon 3
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTTGCTGAGGAGAGGGCTGGACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgctta-attgagttgagcttaacaagatatcatgagaattttcatccttgtcagtactgatgccacatctggctcttgttactggacaacag
 || || || || ||  | | ||||||||||||||| |||||||| || ||| | ||| | ||||| |||||||||||||| || |||||||||||||||||||| | | ||    |||   || | ||  |    |  || ||     | ||||  || ||||| | |    |   | ||||| | |        
TCAACTGAAATTTCAACGCAGCAAGAGGTCTGTTGCCGAGGAGAGAGCCGGAAGGAAGTTGGGTGGCCTCAGGGTTCTCAATTCATACTGGGTGAATGAGgtatgttaacatcacattg---ttgaaaacctggt-tatgagttgctgactttgttggt-ctgattctattgttatgtgttgttgcag--------

upper sequence: GRMZM2G034794_T03 (Zea mays), 5'ss of exon 1
lower sequence: AT4G17390.1 (Arabidopsis thaliana), 5'ss of exon 3
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTTGCTGAGGAGAGGGCTGGACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaattgagttgagcttaacaagatatcatgagaattttcatccttgtcagtactgatgccacatctggctcttgttactggacaacag---------
 |||||||| |||||| | |  ||||| ||||||||||||||  | ||||| || || || || || || |||||| | |||||||||||| | |||||||||||| | |    |||     | || || |   |||  |   |  |    ||| | || |   |   ||  ||  |  || |   |  |    |         
ACAGCTCAAATTCCAGCGTAGTAAGAGATCTGTTGCTGAGGAACGTGCTGGTCGCAAACTGGGAGGCCTTAGGGTTGTTAACTCCTACTGGCTCAATGAGgtatgcatcacactgtttttagttactagttgctatgccatcctgtaaatgtgttaatagtatggaatcaagtgagtaatggtttggttctctggttttctcag

upper sequence: GRMZM2G034794_T03 (Zea mays), 5'ss of exon 1
lower sequence: PP1S134_151V6.1 (Physcomitrella patens), 5'ss of exon 3
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTTGCTGAGGAGAGGGCTGGACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaattgagttgagcttaacaagatatcatgagaattttcat---ccttgtc---agtactgatgcc-acatctggctcttgttactggacaacag
 ||||||||||||||| | ||   ||||||||||||||||||| | |||||||| || |||||||| || || || || ||||| |||||| | ||  |||||   | | |    ||   | | | |   |||     | |   ||||      ||||   |  |    |||   ||           ||     |  ||| 
GCAGCTCAAGTTCCAGCGTAATTTGAGGTCTGTTGCTGAGGAGCGCGCTGGACGCAAACTTGGTGGCCTTAGAGTCCTTAACTCTTACTGGATCAACCAGgtaaagt-agtgactttttccgtgagagcttattgcttgcacgctcatgagttatgtctaaaacatcattgcttgcaagacagctgcattttcaaatcaca-

upper sequence: GRMZM2G034794_T03 (Zea mays), 5'ss of exon 1
lower sequence: PP1S68_114V6.1 (Physcomitrella patens), 5'ss of exon 3
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTTGCTGAGGAGAGGGCTGGACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaattgagttgagcttaacaagatatcatgagaattttcatccttgtcagtactgatgccacatctggctcttgttactggacaacag--------
 ||||||||||||||| | |||  | | |||||||| |||||| |||| ||| |||||||||| || ||||||||||||||||| |||||| | ||  |||| || | ||     |||    | ||| |   |   |   ||| | | |  || |  |||| ||  |   |  || | | |    |      |          
GCAGCTCAAGTTCCAGCGCAACTTGCGTTCTGTTGCGGAGGAGCGGGCAGGAAGAAAGCTTGGAGGCCTCAGGGTTCTCAACTCTTACTGGATCAACCAGgtgtgttgaaacatcttggctcttacatgg-gttccgcccattctgagcactggc--tactcatttcggttaagggtttagggtttaaggttctatttttgtg

upper sequence: GRMZM2G034794_T03 (Zea mays), 5'ss of exon 1
lower sequence: PP1S152_141V6.1 (Physcomitrella patens), 5'ss of exon 3
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTTGCTGAGGAGAGGGCTGGACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatg-------cttaattgagttgagcttaacaagatatcatgagaattttcatcctt--gtcagtactgatgccacatctggctcttgttactggacaacag
 ||||||||||||||| | ||   ||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||| |||||| | ||  |||||||       |||  | | ||       | ||   | |  | |  |||||  |  ||  |||  |    |||      |      | || |   | ||    
ACAGCTCAAGTTCCAGCGTAATTTGAGGTCTGTTGCTGAGGAGCGGGCTGGACGCAAGCTTGGTGGGCTCAGGGTTCTCAACTCTTACTGGATCAACCAGgtatgtaatccgcttcttcgcgtcacttacatcagtgttttcttattatttttctttttcagtctatgtccatgttttccccaaggttagtgataaggca----

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|50332713|gb|CO527839.1|CO527839
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|50331697|gb|CO526823.1|CO526823
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|83278618|gb|DV942626.1|DV942626
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|76292095|gb|DV031663.1|DV031663
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211251604|gb|FL262019.1|FL262019
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTG
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTG
EST: gi|149089967|gb|EE179256.2|EE179256
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|14244396|gb|BG842379.2|BG842379
EST:     ACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: ACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211249376|gb|FL262006.1|FL262006
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCC-ACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|78119640|gb|DV538024.1|DV538024
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|89247240|gb|DY619026.1|DY619026
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211323266|gb|FL262055.1|FL262055
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTTGAGATCATTCTTGTTGATGTGGCC-ACAC
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTT-GAGATCATTCTTGTTGATGTGGCCCACAC
EST: gi|211321085|gb|FL262032.1|FL262032
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATWGCACCTACAAGTACTTTGAGATCA
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCA
EST: gi|71443996|gb|DR825046.1|DR825046
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211325438|gb|FL262068.1|FL262068
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACT
EST: gi|30306793|gb|CD001466.1|CD001466
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211251607|gb|FL262022.1|FL262022
EST:     GACGAAAGCTTGGTGGACTCAGG-TTCTCAACTCCTACTGGGTGAAYGAG                         GATAGCACCTACAAGTACTTTGAGA
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGA
EST: gi|113789347|gb|DW909163.1|DW909163
EST:     CTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: CTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|78119641|gb|DV538025.1|DV538025
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|76292094|gb|DV031662.1|DV031662
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCCCACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|50327061|gb|CO522187.1|CO522187
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|1713336|gb|AA143931.1|AA143931
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTG
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTG
EST: gi|9254923|gb|BE345391.1|BE345391
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|148931461|gb|EC874453.2|EC874453
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211325435|gb|FL262065.1|FL262065
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCC-ACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|9254922|gb|BE345390.1|BE345390
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211325441|gb|FL262071.1|FL262071
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211043357|gb|FL434192.1|FL434192
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211251603|gb|FL262018.1|FL262018
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCA
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCA
EST: gi|211322521|gb|FL456184.1|FL456184
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|30306792|gb|CD001465.1|CD001465
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|76014099|gb|DT941269.1|DT941269
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|74245396|gb|DT653310.1|DT653310
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|86466877|gb|DY233247.1|DY233247
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCATCTCCTACTGGGTGAGTGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|60345779|gb|DN212752.1|DN212752
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|116819689|gb|EC862837.1|EC862837
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAATTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTGGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|148937681|gb|EC881877.2|EC881877
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|50332714|gb|CO527840.1|CO527840
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|60357352|gb|DN224325.1|DN224325
EST:     GACGAAAGCTTGGTGGACTCAGGGTTTTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211325433|gb|FL262063.1|FL262063
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAAGCACCTAC
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATA-GCACCTAC
EST: gi|148957396|gb|EC903451.2|EC903451
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|31361170|gb|CD445527.1|CD445527
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|149089966|gb|EE179255.2|EE179255
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|31354615|gb|CD438972.1|CD438972
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|32835250|gb|CD974928.1|CD974928
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTAC
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTAC
EST: gi|60339194|gb|DN206167.1|DN206167
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211321088|gb|FL262035.1|FL262035
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|71443997|gb|DR825047.1|DR825047
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|60342479|gb|DN209452.1|DN209452
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211323259|gb|FL262048.1|FL262048
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211323267|gb|FL262056.1|FL262056
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCA
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCA
EST: gi|211251605|gb|FL262020.1|FL262020
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|4647041|gb|AI622116.1|AI622116
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|78073803|gb|DV502237.1|DV502237
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211323263|gb|FL262052.1|FL262052
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCA
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCA
EST: gi|60399362|gb|DN232176.1|DN232176
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211249374|gb|FL262004.1|FL262004
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCC
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCC
EST: gi|211325442|gb|FL262072.1|FL262072
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTA
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTA
EST: gi|211251614|gb|FL262029.1|FL262029
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|4804132|gb|AI665998.1|AI665998
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211321097|gb|FL262044.1|FL262044
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATSAS                         GATAGCACCTACAAGYACTTTGAGATCATCTCTTGTTGATGTGGCC-ACAC
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCAT-TCTTGTTGATGTGGCCCACAC
EST: gi|211325432|gb|FL262062.1|FL262062
EST:     ACGAAAGCTTGGTGGACTCAGGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGG
genomic: ACGAAAGCTTGGTGGACTCAGGG-TTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGG
EST: gi|18964393|gb|BM660980.1|BM660980
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAATTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTGGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|113702678|gb|EE680182.1|EE680182
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|74239605|gb|DT647519.1|DT647519
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211249383|gb|FL262013.1|FL262013
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCNNTGTTGATGTGGCCCACAC
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCT-TGTTGATGTGGCCCACAC
EST: gi|60356453|gb|DN223426.1|DN223426
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|60343082|gb|DN210055.1|DN210055
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211321095|gb|FL262042.1|FL262042
EST:     ACGAGAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: ACGA-AAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|33102586|gb|CF062546.1|CF062546
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAATTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTAC
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTAC
EST: gi|148929092|gb|EC874452.2|EC874452
EST:     CTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAGTGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: CTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|16925583|gb|BM078651.1|BM078651
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|60397206|gb|DN230022.1|DN230022
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|50327060|gb|CO522186.1|CO522186
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|60349241|gb|DN216214.1|DN216214
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211323258|gb|FL262047.1|FL262047
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGT
EST: gi|211251611|gb|FL262026.1|FL262026
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATTAGCACCTACAAGTACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGAT-AGCACCTACAAGTACT
EST: gi|211325443|gb|FL262073.1|FL262073
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211321084|gb|FL262031.1|FL262031
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTG
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTG
EST: gi|33096855|gb|CF056815.1|CF056815
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|148957040|gb|EC903000.2|EC903000
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|101384828|gb|EB814460.1|EB814460
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|60339489|gb|DN206462.1|DN206462
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211249384|gb|FL262014.1|FL262014
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACT
EST: gi|211323268|gb|FL262057.1|FL262057
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGGTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|50331696|gb|CO526822.1|CO526822
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211249375|gb|FL262005.1|FL262005
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCC-ACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211251608|gb|FL262023.1|FL262023
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACA
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACA
EST: gi|149104485|gb|EE289932.2|EE289932
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|5739712|gb|AI947288.1|AI947288
EST:     AGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: AGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211321094|gb|FL262041.1|FL262041
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGT
EST: gi|211043356|gb|FL434191.1|FL434191
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|32835930|gb|CD975608.1|CD975608
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGT
EST: gi|101384826|gb|EB814459.1|EB814459
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211325437|gb|FL262067.1|FL262067
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|8665666|gb|BE186482.1|BE186482
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211325440|gb|FL262070.1|FL262070
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTAC
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTAC
EST: gi|211323257|gb|FL262046.1|FL262046
EST:     GACVAAAGCTTGGTGGACTCAAGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGSACCTACAAGTACTTTGAGATCATT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATT
EST: gi|50334250|gb|CO529376.1|CO529376
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
EST: gi|211249377|gb|FL262007.1|FL262007
EST:     GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT
genomic: GACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1225

CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTTGCTGAGGAGAGGGCTGGACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACTACCATCCGCAATGATCCAAGGATCAACTGGCTATGCAATCCTGTGCACA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 775

CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTTGCTGAGGAGAGGGCTGGACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACTACCATCCGCAATGATCCAAGGATCAACTGGCTATGCAATCCTGTGCACA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 574

CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTTGCTGAGGAGAGGGCTGGACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACTACCATCCGCAATGATCCAAGGATCAACTGGCTATGCAATCCTGTGCACA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 759

CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTTGCTGAGGAGAGGGCTGGACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaa ... tggacaacagGATAGCACCTACAAGTACTTTGAGATCATTCTTGTTGATGTGGCCCACACTACCATCCGCAATGATCCAAGGATCAACTGGCTATGCAATCCTGTGCACA


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTTGCTGAGGAGAGGGCTGGACGAAAGCTTGGTGGACTCAGGGTTCTCAACTCCTACTGGGTGAATGAGgtatgcttaattgagttgagcttaacaagatatcatgagaattttcatccttgtcagtactgatgccacatctggctcttgttactggacaacag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGTGGA