1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CTTTGTTCTCCATCTTTTACCTCTTGTAGTTACACAAGAACAACTTGATTGTGCTAAACATGCAATCAAATCTGCAGTTCTGATGAACTTGGAATCAAGGgtaaattattcttgctcctgatataatgctaagctgggttgttgatttttttgatcacttcgtttctagatagtagtagttctgattaaaagtgagttat...
species | Zea mays |
transcript | GRMZM2G032759_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GTGCTAAACATGCAATCAAATCTGCAGTTCTGATGAACTTGGAATCAAGG GCTCAAGTAACCTGTCTCTTTTTGGTCATTGTGCTCCAACGTGACATCACAEST: gi|12972543|gb|BG268034.1|BG268034
genomic: GTGCTAAACATGCAATCAAATCTGCAGTTCTGATGAACTTGGAATCAAGGgtaaattatt ... ttgtatatagGCTCAAGTAACCTGTCTCTTTTTGGTCATTGTGCTCCAACGTGACATCACA
EST: TCTGCAGTTCTGATGAACTTGGAATCAAGG GCTCAAGTAACCTGTCTCTTTTTGGTCATTGTGCTCCAACGTGACATCACAEST: gi|60336925|gb|DN203898.1|DN203898
genomic: TCTGCAGTTCTGATGAACTTGGAATCAAGGgtaaattatt ... ttgtatatagGCTCAAGTAACCTGTCTCTTTTTGGTCATTGTGCTCCAACGTGACATCACA
EST: GTGCTAAACATGCAATCAAATCTGCAGTTCTGATGAACTTGGAATCAAGG GCTCAAGTAACCTGTCTCTTTTTGGTCATTGTGCTCCAACGTGACATCACAEST: gi|4647583|gb|AI622658.1|AI622658
genomic: GTGCTAAACATGCAATCAAATCTGCAGTTCTGATGAACTTGGAATCAAGGgtaaattatt ... ttgtatatagGCTCAAGTAACCTGTCTCTTTTTGGTCATTGTGCTCCAACGTGACATCACA
EST: GTGCTAAACATGCAATCAAATCTGCAGTTCTGATGAACTTGGAATCAAGG GCTCAAGTAACCTGTCTCTTTTTGGTCATTGTGCTCCAACGTGACATCACAEST: gi|60356400|gb|DN223373.1|DN223373
genomic: GTGCTAAACATGCAATCAAATCTGCAGTTCTGATGAACTTGGAATCAAGGgtaaattatt ... ttgtatatagGCTCAAGTAACCTGTCTCTTTTTGGTCATTGTGCTCCAACGTGACATCACA
EST: GTGCTAAACATGCAATCAAATCTGCAGTTCTGATGAACTTGGAATCAAGG GCTCAAGTAACCTGTCTCTTTTTGGTCATTGTGCTCCAACGTGACATCACAEST: gi|83279331|gb|DV943339.1|DV943339
genomic: GTGCTAAACATGCAATCAAATCTGCAGTTCTGATGAACTTGGAATCAAGGgtaaattatt ... ttgtatatagGCTCAAGTAACCTGTCTCTTTTTGGTCATTGTGCTCCAACGTGACATCACA
EST: GTGCTAAACATGCAATCAAATCTGCAGTTTTGATGAACTTGGAATCAAGG GCTCAAGTAACCTGTCTCTTTTTGGTCATTGTGCTCCAACGTGACATCACA
genomic: GTGCTAAACATGCAATCAAATCTGCAGTTCTGATGAACTTGGAATCAAGGgtaaattatt ... ttgtatatagGCTCAAGTAACCTGTCTCTTTTTGGTCATTGTGCTCCAACGTGACATCACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTTGTTCTCCATCTTTTACCTCTTGTAGTTACACAAGAACAACTTGATTGTGCTAAACATGCAATCAAATCTGCAGTTCTGATGAACTTGGAATCAAGGgtaaattattcttgctcctgatataatgctaagctgggttgttgatttttttgatcacttcgtttctagatagtagtagttctgattaaaagtgagttat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG