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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCATTGCCGAGCTCCTTGACAATGCAATCGATGAGgtaatcattaaggtttttttcgacatgtacagaaagaaactaagacataacatgaagctaagtatggttgtttctgtgacatattttctctcag

Basic information

species Zea mays
transcript GRMZM2G030596_T01
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|101395058|gb|EB819461.1|EB819461
EST:     CCATTGCCGAGCTCCTTGACAATGCAATCGATGAG                         GTGAACAATGGGGCAACATTTGTCCGTGTTAATAAATTTTAAAACCCACGA
genomic: CCATTGCCGAGCTCCTTGACAATGCAATCGATGAGgtaatcatta ... tttctctcagGTGAACAATGGGGCAACATTTGTCCGTGTTAATAAATTTAAAAACCCACGA
EST: gi|76286071|gb|DV025639.1|DV025639
EST:     CCATTGCCGAGCTCCTTGACAATGCAATCGATGAG                         GTGAACAATGGGGCAACATTTGTCCGTGTTAATAAATTTAAAAACCCACGA
genomic: CCATTGCCGAGCTCCTTGACAATGCAATCGATGAGgtaatcatta ... tttctctcagGTGAACAATGGGGCAACATTTGTCCGTGTTAATAAATTTAAAAACCCACGA
EST: gi|91867858|gb|EB399825.1|EB399825
EST:     CCATTGCCGAGCTCCTTGACAATGCAATCGATGAG                         GTGAACAATGGGGCAACATTTGTCCGTGTTAATAAATTTAAAAACCCACGA
genomic: CCATTGCCGAGCTCCTTGACAATGCAATCGATGAGgtaatcatta ... tttctctcagGTGAACAATGGGGCAACATTTGTCCGTGTTAATAAATTTAAAAACCCACGA
EST: gi|78121768|gb|DV540152.1|DV540152
EST:     CCATTGCCGAGCTCCTTGACAATGCAATCGATGAG                         GTGAACAATGGGGCAACATTTGTCCGTGTTAATAAATTTAAAAACCCACGA
genomic: CCATTGCCGAGCTCCTTGACAATGCAATCGATGAGgtaatcatta ... tttctctcagGTGAACAATGGGGCAACATTTGTCCGTGTTAATAAATTTAAAAACCCACGA
EST: gi|78111592|gb|DV529989.1|DV529989
EST:     CCATTGCCGAGCTCCTTGACAATGCAATCGATGAG                         GTGAACAATGGGGCAACATTTGTCCGTGTTAATAAATTTAAAAACCCACGA
genomic: CCATTGCCGAGCTCCTTGACAATGCAATCGATGAGgtaatcatta ... tttctctcagGTGAACAATGGGGCAACATTTGTCCGTGTTAATAAATTTAAAAACCCACGA
EST: gi|78114931|gb|DV533319.1|DV533319
EST:     CCATTGCCGAGCTCCTTGACAATGCAATCGATGAG                         GTGAACAATGGGGCAACATTTGTCCGTGTTAATAAATTTAAAAACCCACGA
genomic: CCATTGCCGAGCTCCTTGACAATGCAATCGATGAGgtaatcatta ... tttctctcagGTGAACAATGGGGCAACATTTGTCCGTGTTAATAAATTTAAAAACCCACGA
EST: gi|78075870|gb|DV504304.1|DV504304
EST:     CCATTGCCGAGCTCCTTGACAATGCAATCGATGAG                         GTGAACAATGGGGCAACATTTGTCCGTGTTAATAAATTTAAAAACCCACGA
genomic: CCATTGCCGAGCTCCTTGACAATGCAATCGATGAGgtaatcatta ... tttctctcagGTGAACAATGGGGCAACATTTGTCCGTGTTAATAAATTTAAAAACCCACGA