1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GTGGCCTCGGCATCTCGCCCCCCGCGCCCCGCCGCCGCCGCCGTGGGCTCCGCCACCGCCAGCTGACCCGGCGTCGTTCTGGCACCATGCTTACATGAGGgtatgtatgcattgtacgcacggccggccggccggcaagtctacgtgctagttatttttggatgcaccgtaagttaactagcttcctagctagggagatttagctagcgttctgacggccggatttcgttttaccag
species | Zea mays |
transcript | GRMZM2G026833_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CGCCACCGCCAGCTGACCCGGCGTCGTTCTGGCACCATGCTTACATGAGG CAGGGGCCTGCTGCCCATATGCCAGACCAGGTGGCGGTGACTCCATGCGTGEST: gi|149104530|gb|EE289981.2|EE289981
genomic: CGCCACCGCCAGCTGACCCGGCGTCGTTCTGGCACCATGCTTACATGAGGgtatgtatgc ... gttttaccagCAGGGGCCTGCTGCCCATATGCCAGACCAGGTGGCGGTGACTCCATGCGTG
EST: CGCCACCGCCAGCTGACCCGGCGTCGTTCTGGCACCATGCTTACATGAGG CAGGGGCCTGCTGCCCATATGCCAGACCAGGTGGCGGTGACTCCATGCGTG
genomic: CGCCACCGCCAGCTGACCCGGCGTCGTTCTGGCACCATGCTTACATGAGGgtatgtatgc ... gttttaccagCAGGGGCCTGCTGCCCATATGCCAGACCAGGTGGCGGTGACTCCATGCGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGGCCTCGGCATCTCGCCCCCCGCGCCCCGCCGCCGCCGCCGTGGGCTCCGCCACCGCCAGCTGACCCGGCGTCGTTCTGGCACCATGCTTACATGAGGgtatgtatgcattgtacgcacggccggccggccggcaagtctacgtgctagttatttttggatgcaccgtaagttaactagcttcctagctagggagatttagctagcgttctgacggccggatttcgttttaccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA