Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTCGCTGAGGAGAGAGCTGGACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcggattgtaacatgaacactcctctttaaacatactagcttgtttatatctgtcaaattttttttctaattgcctgacatgcccatatctcctatcacag

Basic information

species Zea mays
transcript GRMZM2G024354_T01
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G024354_T01 (Zea mays), 5'ss of exon 3
lower sequence: LOC_Os05g19370.1 (Oryza sativa), 5'ss of exon 3
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTCGCTGAGGAGAGAGCTGGACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcggattgtaacatgaacactcctctttaaacatactagcttgtttatatctgtcaaattttttttctaattgcctgacatgcccatatctcctatcacag
|||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| |||||||| ||||| || |||||||||||||||||||||||| ||  ||||  |    ||    || |    ||     | |      ||  | |||       ||||   ||||| | |    |   ||| |  | ||    ||
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCAGTTGCTGAGGAGAGAGCTGGACGCAAGCTGGGTGGACTCAGGGTGCTCAACTCCTACTGGGTGAATGAGgtatatttgatttcactggga----tcttgcggaagatggcaaaaaaaatttcagctgc------ttttcattaattcctt--tgttttcat-tggcttaatgtag

upper sequence: GRMZM2G024354_T01 (Zea mays), 5'ss of exon 3
lower sequence: LOC_Os03g40180.1 (Oryza sativa), 5'ss of exon 3
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTCGCTGAGGAGAGAGCTGGACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcggattgtaacatgaacactcctctttaaacatactagcttgtttatatctgtcaaattttttttctaattgcctgacatgcccatatctcctatcacag
|||||||||||||||||||||||||||||| || ||||||||||||||||| || ||| | || ||||| ||||| || ||||||||||||||||| |||||||||   | | ||    ||      || |  ||    | || |     | |||||| |      ||    ||||  | ||   | |     | |  |       
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCAGTTGCTGAGGAGAGAGCTGGGCGCAAGTTGGGCGGACTCAGGGTGCTCAACTCCTACTGGGTGAACGAGgtacatttcactttactgaga-----tctttcaaagatgattatcaacaatgtatctgcc------ttccattaatgacttggttttctttggtttaatgcag---

upper sequence: GRMZM2G024354_T01 (Zea mays), 5'ss of exon 3
lower sequence: GLYMA05G04870.1 (Glycine max), 5'ss of exon 3
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTCGCTGAGGAGAGAGCTGGACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcggatt-gtaacatgaacactcctctttaaacatactagcttgtttatatctgtcaaattttttttctaattgcctgacatgcccatatctcctatcacag
 || || || || ||| | | |||||||||||| || |||||| |||||||| | ||| | ||||| || |||||||| || || ||||||||||||||||||  |    || | |   |  | | |      |  | |   |   ||| | |     ||   | |  || | |  ||   ||   |  |                 
TCAACTGAAATTTCAGCGCAGCAAGAGGTCTGTTGCCGAGGAGCGAGCTGGAAGGAAGTTGGGTGGCCTCAGGGTTCTCAATTCATACTGGGTGAATGAGgtatgttatctttgcattgttgaaagtgaaacctggata---tgaattgctga--ctggttggactgattctattgttatgtgttgttacag---------------

upper sequence: GRMZM2G024354_T01 (Zea mays), 5'ss of exon 3
lower sequence: GLYMA01G41620.3 (Glycine max), 5'ss of exon 2
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTCGCTGAGGAGAGAGCTGGACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcggattgtaacatgaacactcctctttaaacatactagcttgtttatatctgtcaaattttttttctaattgcctgacatgcccatatctcctatcacag
||| || || || ||| | | ||||||||| || || |||||| |||||||||| ||||| |||||||| ||||| || || || |||||||||||||||||   |   ||||||        ||| || || |||   |  |  ||| || |   |      ||  |||  |||  || || ||||    | | ||         
CCAACTGAAATTTCAGCGAAGCAAGAGGTCAGTTGCCGAGGAGCGAGCTGGACGGAAGCTGGGTGGACTTAGGGTCCTCAATTCTTACTGGGTGAATGAGgtttgtt--attgta------ttacttctgttgaaattga--aatttggttgtgaatcatgtgttgatttggtaaaagcttgtcatg---gtgtttcag-------

upper sequence: GRMZM2G024354_T01 (Zea mays), 5'ss of exon 3
lower sequence: GLYMA17G15230.1 (Glycine max), 5'ss of exon 3
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTCGCTGAGGAGAGAGCTGGACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgg-attgtaacatgaacactcctctttaaacatactagctt-gtttatatctgtcaaattttttttctaattgcctgacatgcccatatctcctatcacag
 || || || || ||  | | |||||||||||| || ||||||||||| ||| | ||| | ||||| || |||||||| || || ||||||||||||||||||  |    ||   |   |  | |  |   ||   |  | ||  ||| |||  | |   || | | || | | |  ||||                           
TCAACTGAAATTTCAACGCAGCAAGAGGTCTGTTGCCGAGGAGAGAGCCGGAAGGAAGTTGGGTGGCCTCAGGGTTCTCAATTCATACTGGGTGAATGAGgtatgttaacatcacattgttgaaaacctggttatgagttgctgactttgttggtctgattctattgttatgtgttgttgcag-------------------------

upper sequence: GRMZM2G024354_T01 (Zea mays), 5'ss of exon 3
lower sequence: PP1S134_151V6.1 (Physcomitrella patens), 5'ss of exon 3
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTCGCTGAGGAGAGAGCTGGACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgta---catcggattgtaacatgaacactcctctttaaacatactagcttgtttatatctgtcaaattttttttctaattgcctgacatgcccatatctcctatcacag
 ||||||||||||||| | ||   ||||||||| ||||||||| | |||||||| || |||||||| || || || |||||||| |||||| | ||  |||||    |  |  || |  | |||   ||  |   |   ||  ||   |   |||| |||   |||  |  || ||   |||  ||||    ||| | ||  |||||| 
GCAGCTCAAGTTCCAGCGTAATTTGAGGTCTGTTGCTGAGGAGCGCGCTGGACGCAAACTTGGTGGCCTTAGAGTCCTTAACTCTTACTGGATCAACCAGgtaaagtagtgactttttccgtgagagcttattgcttg-cacgctca-tgagttatgtcta--aaacatcattgct---tgcaagacagctgcat-tttcaaatcaca-

upper sequence: GRMZM2G024354_T01 (Zea mays), 5'ss of exon 3
lower sequence: PP1S152_141V6.1 (Physcomitrella patens), 5'ss of exon 3
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTCGCTGAGGAGAGAGCTGGACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcggattgtaacatgaacactcctctttaaacatactagcttgtttatatctgtcaaattttttt-tctaattgcctgacatgcccatatctcctatcacag--
 ||||||||||||||| | ||   ||||||||| ||||||||| | |||||||| ||||||||||| || |||||||| ||||| |||||| | ||  |||||        |||||   |    || | | | |   | |  ||  | ||  |||   |    |||||   ||||  | | ||   | ||||    |  |   |  |  
ACAGCTCAAGTTCCAGCGTAATTTGAGGTCTGTTGCTGAGGAGCGGGCTGGACGCAAGCTTGGTGGGCTCAGGGTTCTCAACTCTTACTGGATCAACCAGgta--------tgtaatccgc-ttcttcgcgtcacttacatcagtgttttcttattatttttctttttcagtctatgtccatgttttccccaaggttagtgataaggca

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|148971698|gb|EE022426.2|EE022426
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|31612151|gb|CD568773.1|CD568773
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|60355850|gb|DN222823.1|DN222823
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|148971699|gb|EE022427.2|EE022427
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|78085698|gb|DV514091.1|DV514091
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCCACAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCC-ACAA
EST: gi|211423026|gb|FL362762.1|FL362762
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTTGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|28987027|gb|CB351428.1|CB351428
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|31558580|gb|CD527792.1|CD527792
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|148958704|gb|EC904975.2|EC904975
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|60356777|gb|DN223750.1|DN223750
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|91054516|gb|EB164934.1|EB164934
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|93282983|gb|EB675247.1|EB675247
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|37419820|gb|CF647595.1|CF647595
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|211381495|gb|FL249899.1|FL249899
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCSCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|101382141|gb|EB813126.1|EB813126
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|93283374|gb|EB675638.1|EB675638
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|78112794|gb|DV531188.1|DV531188
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|88752252|gb|DY536393.1|DY536393
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|78113087|gb|DV531481.1|DV531481
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|31664214|gb|CD572939.1|CD572939
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|71325076|gb|DR799222.1|DR799222
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|148958703|gb|EC904974.2|EC904974
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|149074390|gb|EE162776.2|EE162776
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|71325420|gb|DR799393.1|DR799393
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|211532126|gb|FL350197.1|FL350197
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTTGAGATCATCCTTTGTGGGACGTTGCCCACA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTT-GTGG-ACGTTGCCCACA
EST: gi|86474947|gb|DY241317.1|DY241317
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|30087027|gb|CB885235.1|CB885235
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|74237504|gb|DT645418.1|DT645418
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|91054515|gb|EB164933.1|EB164933
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|211381496|gb|FL249900.1|FL249900
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|9731857|gb|BE510609.1|BE510609
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTTGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|211197384|gb|FL306830.1|FL306830
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCANTCCTTGTGGACGTTGCCCACAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCA-TCCTTGTGGACGTTGCCCACAA
EST: gi|148930419|gb|EE284903.2|EE284903
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|5499068|gb|AI854935.1|AI854935
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTTGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|101384800|gb|EB814446.1|EB814446
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|78105635|gb|DV524053.1|DV524053
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|29129791|gb|CB380495.1|CB380495
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|211529122|gb|FL350185.1|FL350185
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTTGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|28873623|gb|CB329588.1|CB329588
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|211381492|gb|FL249896.1|FL249896
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|74240272|gb|DT648186.1|DT648186
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|89757390|gb|DY687014.1|DY687014
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|22713904|gb|BU197434.1|BU197434
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTTGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|4314594|gb|AI461535.1|AI461535
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCGTACTGGGTGAATGAG                         GATAGTACCTGCAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|110942618|gb|EE162775.1|EE162775
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|31355299|gb|CD439656.1|CD439656
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTTGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|5398768|gb|AI812233.1|AI812233
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTTGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|71325077|gb|DR799223.1|DR799223
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACTAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|93011913|gb|EB637433.1|EB637433
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|71761099|gb|DR959036.1|DR959036
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|18179860|gb|BM381070.1|BM381070
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|89250635|gb|DY622421.1|DY622421
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|78112793|gb|DV531187.1|DV531187
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|30031772|gb|CB833623.1|CB833623
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|78123294|gb|DV541678.1|DV541678
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|166700002|gb|EG166059.1|EG166059
EST:     TTCTTAACTCCTACTAGGGTGAATGAG                         GATAGTACCTACAAGTACTTTGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: TTCTTAACTCCTACT-GGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|148990298|gb|EE031897.2|EE031897
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|149100978|gb|EE187075.2|EE187075
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|91054672|gb|EB165090.1|EB165090
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|76012915|gb|DT940085.1|DT940085
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|149079253|gb|EE168223.2|EE168223
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|78080100|gb|DV508512.1|DV508512
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|60351493|gb|DN218466.1|DN218466
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|211381490|gb|FL249894.1|FL249894
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|29576920|gb|CB617032.1|CB617032
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|93282982|gb|EB675246.1|EB675246
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|30031777|gb|CB833628.1|CB833628
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|71323823|gb|DR798584.1|DR798584
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|9733064|gb|BE511816.1|BE511816
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTTGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|60358991|gb|DN225964.1|DN225964
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|32833630|gb|CD973308.1|CD973308
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGT
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGT
EST: gi|78085697|gb|DV514090.1|DV514090
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|71325422|gb|DR799394.1|DR799394
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|149100977|gb|EE187074.2|EE187074
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|31349970|gb|CD434327.1|CD434327
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTTGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|29130273|gb|CB380977.1|CB380977
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|29545162|gb|CB605340.1|CB605340
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|83278328|gb|DV942336.1|DV942336
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|37419568|gb|CF647467.1|CF647467
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|60348816|gb|DN215789.1|DN215789
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|71441909|gb|DR822959.1|DR822959
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|60400339|gb|DN233146.1|DN233146
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|21389932|gb|BQ527981.1|BQ527981
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTTGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|30087033|gb|CB885241.1|CB885241
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|76012914|gb|DT940084.1|DT940084
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|31558581|gb|CD527793.1|CD527793
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|60397795|gb|DN230611.1|DN230611
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|148930120|gb|EC872451.2|EC872451
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|31348940|gb|CD433297.1|CD433297
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTTGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|71435340|gb|DR816390.1|DR816390
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|74240273|gb|DT648187.1|DT648187
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|20300116|gb|BQ163059.1|BQ163059
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTTGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|211183118|gb|FL314049.1|FL314049
EST:     CGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTTGGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTG
genomic: CGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACT-GGG-TGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTG
EST: gi|211378856|gb|FL249890.1|FL249890
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|31997544|gb|CD661650.1|CD661650
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|60348900|gb|DN215873.1|DN215873
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|149039465|gb|EE046604.2|EE046604
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|32834038|gb|CD973716.1|CD973716
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGTA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTA
EST: gi|89757392|gb|DY687015.1|DY687015
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|71770856|gb|DR968793.1|DR968793
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|60401341|gb|DN234148.1|DN234148
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTTGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|60348156|gb|DN215129.1|DN215129
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|148949076|gb|EC894501.2|EC894501
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|211522788|gb|FL337756.1|FL337756
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTTGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
EST: gi|32848748|gb|CD988429.1|CD988429
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGCACCTACAAGT
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGT
EST: gi|94478114|gb|EB707072.1|EB707072
EST:     GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAG                         GATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA
genomic: GACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 47 (downstream exon)
Score: 728

CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTCGCTGAGGAGAGAGCTGGACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAAGCCATCAAAACCGACCCGAGGATCAACTGGCTATGCAACCCTGTGCACA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 239

CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTCGCTGAGGAGAGAGCTGGACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAAGCCATCAAAACCGACCCGAGGATCAACTGGCTATGCAACCCTGTGCACA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 145

CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTCGCTGAGGAGAGAGCTGGACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAAGCCATCAAAACCGACCCGAGGATCAACTGGCTATGCAACCCTGTGCACA


Block sizes: 44 (upstream exon), 47 (downstream exon)
Score: 202

CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTCGCTGAGGAGAGAGCTGGACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcgga ... cctatcacagGATAGTACCTACAAGTACTTCGAGATCATCCTTGTGGACGTTGCCCACAAAGCCATCAAAACCGACCCGAGGATCAACTGGCTATGCAACCCTGTGCACA


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CCAGCTCAAGTTCCAGAGGAACAAGAGGTCTGTCGCTGAGGAGAGAGCTGGACGTAAGCTTGGTGGACTGAGGGTTCTTAACTCCTACTGGGTGAATGAGgtacatcggattgtaacatgaacactcctctttaaacatactagcttgtttatatctgtcaaattttttttctaattgcctgacatgcccatatctcctatcacag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGTGGA