1 5' 3' | 2 5' 3' | 3 5' 3' |
GGATGCTGGAGAGGCAGGAGAAGTAAAGAGCGCAGAAGGAGAGTTCTTATTGCGTGTTGATGGTGGTGCTACTGTTAATAATCTTCTAATGCAGATCCAGgtaaagaaaatgacctcttctctctattcacatacaagcacttatgacttatccatgtatcttaggaattgaatttgtggtcaattatactaacatgttt...
species | Zea mays |
transcript | GRMZM2G023163_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGCGTGTTGATGGTGGTGCTACTGTTAATAATCTTCTAATGCAGATCCAG GCTGATTTATTAGGCAGCCCTGTTGTCAGACCAGCTGACATAGAGACCACAEST: gi|113703770|gb|EE681274.1|EE681274
genomic: TGCGTGTTGATGGTGGTGCTACTGTTAATAATCTTCTAATGCAGATCCAGgtaaagaaaa ... ctgcctgcagGCTGATTTATTAGGCAGCCCTGTTGTCAGACCAGCTGACATAGAGACCACA
EST: TGCGTGTTGATGGCGGTGCTACTGTTAATAATCTTCTAATGCAGATCCAG GCTGATTTATTAGGCAGCCCTGTTGTCAGACCAGCTGACATAGAGACCACAEST: gi|94475698|gb|EB704656.1|EB704656
genomic: TGCGTGTTGATGGTGGTGCTACTGTTAATAATCTTCTAATGCAGATCCAGgtaaagaaaa ... ctgcctgcagGCTGATTTATTAGGCAGCCCTGTTGTCAGACCAGCTGACATAGAGACCACA
EST: TGCGTGTTGATGGTGGTGCTACTGTTAATAATCTTCTAATGCAGATCCAG GCTGATTTATTAGGCAGCCCTGTTGTCAGCCCAGCTGACATAGAGACCACAEST: gi|37400870|gb|CF637795.1|CF637795
genomic: TGCGTGTTGATGGTGGTGCTACTGTTAATAATCTTCTAATGCAGATCCAGgtaaagaaaa ... ctgcctgcagGCTGATTTATTAGGCAGCCCTGTTGTCAGACCAGCTGACATAGAGACCACA
EST: TGCGTGTTGATGGCGGTGCTACTGTTAATAATCTTCTAATGCAGATCCAG GCTGATTTATTAGGCAGCCCTGTTGTCAGACCAGCTGACATAGAGACCACAEST: gi|211230695|gb|FL436013.1|FL436013
genomic: TGCGTGTTGATGGTGGTGCTACTGTTAATAATCTTCTAATGCAGATCCAGgtaaagaaaa ... ctgcctgcagGCTGATTTATTAGGCAGCCCTGTTGTCAGACCAGCTGACATAGAGACCACA
EST: TGCGTGTTGATGGTGGTGCTACTGTTAATAATCTTCTAATGCAGATCCAG GCTGATTTATTAGGCAGCCCTGTTGTCAGACCAGCTGACATAGAGACCACA
genomic: TGCGTGTTGATGGTGGTGCTACTGTTAATAATCTTCTAATGCAGATCCAGgtaaagaaaa ... ctgcctgcagGCTGATTTATTAGGCAGCCCTGTTGTCAGACCAGCTGACATAGAGACCACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGATGCTGGAGAGGCAGGAGAAGTAAAGAGCGCAGAAGGAGAGTTCTTATTGCGTGTTGATGGTGGTGCTACTGTTAATAATCTTCTAATGCAGATCCAGgtaaagaaaatgacctcttctctctattcacatacaagcacttatgacttatccatgtatcttaggaattgaatttgtggtcaattatactaacatgttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT