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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TATATCTAGgtaagaagaatcatttatttggtcagtttcaagctgcgtctagcagatccgtaaacaggaaaggttgtttatttcatctggtcattag

Basic information

species Zea mays
transcript GRMZM2G021573_T02
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|101388676|gb|EB816323.1|EB816323
EST:     AGTATATCTAG                         GTGGTTACGACACCGAAGACAAGGCCGCGAGGGCTTATGATCTGGCTGCTCT
genomic: AGTATATCTAG
EST: gi|94479778|gb|EB708736.1|EB708736
EST:     GAAAAGGCAGACAAGTATATCTAG                         GTGGTTACGACACCGAAGACAAGGCCGCGAGGGCTTATGATCTGGCTGCTCT
genomic: GAAAAGGCAGACAAGTATATCTAG