1 5' 3' | 2 5' 3' | 3 5' 3' |
CGCCGCCCTCTCTGAGGTCGAGCGCCTTGGCCTCTCCATCATGAACACCAATGTGCTCCCCTTCACAGCCTCCTCCCTCGACATCACCATCATGGCCATGgtgagtcggctcgatcaatcactatctgtctgccatgcatgatagagtaactcgtcatgttgatgatgctaactcatctggcgatattcccgcag
species | Zea mays |
transcript | GRMZM2G019806_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ATGTGCTCCCCTTCACAGCCTCCTCCCTCGACATCACCATCATGGCCATG GCTGGTGACGACTTCTGCTTGTCTGTCAAGGATATTGTCAAGAAGCTAAATEST: gi|76013247|gb|DT940417.1|DT940417
genomic: ATGTGCTCCCCTTCACAGCCTCCTCCCTCGACATCACCATCATGGCCATGgtgagtcggc ... attcccgcagGCTGGTGACGACTTCTGCTGGTCTGTCAAGGATATTGTCAAGAAGCTAAAT
EST: ATGTGCTCCCCTTCACAGCCTCCTCCCTCGACATCACCATCATGGCCATG GCTGGTGACGACTTCTGCTGGTCTGTCAAGGATATTGTCAAGAAGCTAAATEST: gi|32790818|gb|CD943054.1|CD943054
genomic: ATGTGCTCCCCTTCACAGCCTCCTCCCTCGACATCACCATCATGGCCATGgtgagtcggc ... attcccgcagGCTGGTGACGACTTCTGCTGGTCTGTCAAGGATATTGTCAAGAAGCTAAAT
EST: ATGTGCTCCCCTTCACAGCCTCCTCCCTCGACATCACCATCATGGCCATG GCTGGTGACGACTTCTGCTTGTCTGTCAAGGATATTGTCAAGAAGCTAAATEST: gi|32804355|gb|CD956591.1|CD956591
genomic: ATGTGCTCCCCTTCACAGCCTCCTCCCTCGACATCACCATCATGGCCATGgtgagtcggc ... attcccgcagGCTGGTGACGACTTCTGCTGGTCTGTCAAGGATATTGTCAAGAAGCTAAAT
EST: ATGTGCTCCCCTTCACAGCCTCCTCCCTCGACATCACCATCATGGCCATG GCTGGTGACGACTTCTGCTTGTCTGTCAAGGATATTGTCAAGAAGCTAAAT
genomic: ATGTGCTCCCCTTCACAGCCTCCTCCCTCGACATCACCATCATGGCCATGgtgagtcggc ... attcccgcagGCTGGTGACGACTTCTGCTGGTCTGTCAAGGATATTGTCAAGAAGCTAAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGCCGCCCTCTCTGAGGTCGAGCGCCTTGGCCTCTCCATCATGAACACCAATGTGCTCCCCTTCACAGCCTCCTCCCTCGACATCACCATCATGGCCATGgtgagtcggctcgatcaatcactatctgtctgccatgcatgatagagtaactcgtcatgttgatgatgctaactcatctggcgatattcccgcag
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