1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TCCAGGAGTAAGATGGGATGATGTTGCCGGACTTAGTGAGGCCAAACGACTCCTCGAGGAAGCAGTTGTGCTTCCTCTCTGGATGCCTGAATATTTTCAGgtaatagtctatattcttctacgctgtcccttattggttcaaactaagcactgtaaagtatctgaaaaatgtctatttgttcttggcactaacacatttt...
species | Zea mays |
transcript | GRMZM2G017305_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TCCTCTCTGGATGCCTGAACATTTTCAG GGTGTTCGTCGACCTTGGAAAGGAGTTCTTATGTTTGGTCCACCAGGCACGEST: gi|213192745|gb|FM193924.1|FM193924
genomic: TCCTCTCTGGATGCCTGAATATTTTCAGgtaatagtct ... tccttatcagGGTATTCGTCGACCTTGGAAAGGAGTTCTTATGTTTGGTCCACCAGGCACG
EST: GCTTCCTCTCTGGATGCCTGAATATTTTCAG GGTATTCGTCGACCTTGGAAAGGAGTTCTTATGTTTGGTCCACCAGGCACGEST: gi|60344133|gb|DN211106.1|DN211106
genomic: GCTTCCTCTCTGGATGCCTGAATATTTTCAGgtaatagtct ... tccttatcagGGTATTCGTCGACCTTGGAAAGGAGTTCTTATGTTTGGTCCACCAGGCACG
EST: AGCAGTTGTGCTTCCTCTCTGGATGCCTGAATATTTTCAG GGTATTCGTCGACCTTGGAAAGGAGTTCTTATGTTTGGTCCACCAGGCACG
genomic: AGCAGTTGTGCTTCCTCTCTGGATGCCTGAATATTTTCAGgtaatagtct ... tccttatcagGGTATTCGTCGACCTTGGAAAGGAGTTCTTATGTTTGGTCCACCAGGCACG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCCAGGAGTAAGATGGGATGATGTTGCCGGACTTAGTGAGGCCAAACGACTCCTCGAGGAAGCAGTTGTGCTTCCTCTCTGGATGCCTGAATATTTTCAGgtaatagtctatattcttctacgctgtcccttattggttcaaactaagcactgtaaagtatctgaaaaatgtctatttgttcttggcactaacacatttt
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