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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgcttggcttattttctgtgctcatattttgttgtatcaagtgctcaaatgctgtattaagttgcctcaaatagaactgaatttgaaatgcgctctgcag

Basic information

species Zea mays
transcript GRMZM2G017086_T01
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G017086_T01 (Zea mays), 5'ss of exon 3
lower sequence: LOC_Os01g36930.1 (Oryza sativa), 5'ss of exon 3
GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgcttggcttattttctgtgctcatattttgttgtatcaagtgctcaa-atgct---gtattaagttgcct-caaatagaactga--atttgaaatgcgctctgcag
|| ||||||||||||||||||||||||||||||||||||||||  |   | | | |||  | | ||| |||| || || ||    || || |   |   ||||| |  | | |  | |||    | |  ||| ||||||| ||||||||
GATGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagattatcaacctgtcttccattcacat-ttttattctaccagacccttaatacattcaagtattcaactacatgtatataatgttaaggattggaaatgcactctgcag
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211522096|gb|FL426854.1|FL426854
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211512097|gb|FL429023.1|FL429023
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211043164|gb|FL426037.1|FL426037
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211020022|gb|FL404266.1|FL404266
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211140278|gb|FL369584.1|FL369584
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211542655|gb|FL412583.1|FL412583
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|241994792|gb|GR421145.1|GR421145
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211144966|gb|FL424885.1|FL424885
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|78121540|gb|DV539924.1|DV539924
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211168209|gb|FL421347.1|FL421347
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211449542|gb|FL376102.1|FL376102
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211504148|gb|FL387155.1|FL387155
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211408393|gb|FL407128.1|FL407128
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211066798|gb|FL430461.1|FL430461
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGTCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211133807|gb|FL389465.1|FL389465
EST:     GACGATGCMGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCCAAAGTTGATGATGATTGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211513751|gb|FL391725.1|FL391725
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211321831|gb|FL416221.1|FL416221
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211059996|gb|FL387688.1|FL387688
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211455945|gb|FL376150.1|FL376150
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211099805|gb|FL386855.1|FL386855
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211008625|gb|FL395313.1|FL395313
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211106564|gb|FL394472.1|FL394472
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|32935100|gb|CF039912.1|CF039912
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211037648|gb|FL421296.1|FL421296
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|32911302|gb|CF016114.1|CF016114
EST:     TGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: TGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211219147|gb|FL370888.1|FL370888
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211141642|gb|FL394943.1|FL394943
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211085323|gb|FL409653.1|FL409653
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211254374|gb|FL402662.1|FL402662
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGGATGAGATTGTGAAAAGCT
genomic: GACGATGCAGATTGGTCTACTTTGGGAGT-GAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTG-ATGAGATTGTGAAA-GCT
EST: gi|74240015|gb|DT647929.1|DT647929
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211431557|gb|FL401073.1|FL401073
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211141962|gb|FL418179.1|FL418179
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|13237239|gb|BG355253.1|BG355253
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|67017287|gb|CO446036.1|CO446036
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211536230|gb|FL396283.1|FL396283
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211527639|gb|FL412989.1|FL412989
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|33094903|gb|CF054897.1|CF054897
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211335073|gb|FL428116.1|FL428116
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|31998167|gb|CD661962.1|CD661962
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211459123|gb|FL410721.1|FL410721
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211379399|gb|FL389227.1|FL389227
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211076695|gb|FL396856.1|FL396856
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211036892|gb|FL381576.1|FL381576
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211121494|gb|FL373631.1|FL373631
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|50332356|gb|CO527482.1|CO527482
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
EST: gi|211521051|gb|FL387963.1|FL387963
EST:     GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGAT                         GGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG
genomic: GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgct ... cgctctgcagGGCCAAAAGTTGATGATGATAGGCACGGCTGATGAGATTGTGAAAGCTCCG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GACGATGCAGATTGGTCTACTTTGGGAGTGAAAGATgtgagatgcttggcttattttctgtgctcatattttgttgtatcaagtgctcaaatgctgtattaagttgcctcaaatagaactgaatttgaaatgcgctctgcag

- - - GCAGAT