1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TAACAGCTATTCCTCGCACTACCAAGAATTCGAGTGCATGAGGCAAGAAATGGAAGAACTTTTATATGAATATCAGGTTGACATTGTTTTCTCAGGACATgtaagctcacacatccggtgaaggcttgattcgaatttcatttcaccgcttcagaatcaaggcctgctgcagtttacttaaaatttagcattttatcatt...
species | Zea mays |
transcript | GRMZM2G014193_T03 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGGAAGAACTTTTATATGAATATCAGGTTGACATTGTTTTCTCAGGACAT GTACATGCATACGAAAGGATGAACCGAGTATTTAEST: gi|78093471|gb|DV521845.1|DV521845
genomic: TGGAAGAACTTTTATATGAATATCAGGTTGACATTGTTTTCTCAGGACATgtaagctcac ... gatactaaagGTACATGCATACGAAAGGATGGACCGAGTATTTA
EST: TGGAAGAACTTTTATATGAATATCAGGTTGACATTGTTTTCTCAGGACAT GTACATGCATACGAAAGGATGGACCGAGTATTTAACTACACATTGGACCCCEST: gi|67022183|gb|CO450932.1|CO450932
genomic: TGGAAGAACTTTTATATGAATATCAGGTTGACATTGTTTTCTCAGGACATgtaagctcac ... gatactaaagGTACATGCATACGAAAGGATGGACCGAGTATTTAACTACACATTGGACCCC
EST: GTTTTCTCATGACAT GTACATGCATACGAAAGGATGAACCGAGTATTTAACTACACATTGGACCCCEST: gi|71318569|gb|DR796044.1|DR796044
genomic: GTTTTCTCAGGACATgtaagctcac ... gatactaaagGTACATGCATACGAAAGGATGGACCGAGTATTTAACTACACATTGGACCCC
EST: TGGAAGAACTTTTATATGAATATCAGGTTGACATTGTTTTCTCAGGACAT GTACATGCATACGAAAGGATGGACCGAGTATTTAACTACACATTGGACCCCEST: gi|32799587|gb|CD951823.1|CD951823
genomic: TGGAAGAACTTTTATATGAATATCAGGTTGACATTGTTTTCTCAGGACATgtaagctcac ... gatactaaagGTACATGCATACGAAAGGATGGACCGAGTATTTAACTACACATTGGACCCC
EST: TGGAAGAACTTTTATATGAATATCAGGTTGACATTGTTTTCTCAGGACAT GTACATGCATACGAAAGGATGAACCGAGTATTTA
genomic: TGGAAGAACTTTTATATGAATATCAGGTTGACATTGTTTTCTCAGGACATgtaagctcac ... gatactaaagGTACATGCATACGAAAGGATGGACCGAGTATTTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAACAGCTATTCCTCGCACTACCAAGAATTCGAGTGCATGAGGCAAGAAATGGAAGAACTTTTATATGAATATCAGGTTGACATTGTTTTCTCAGGACATgtaagctcacacatccggtgaaggcttgattcgaatttcatttcaccgcttcagaatcaaggcctgctgcagtttacttaaaatttagcattttatcatt
- - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC