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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAACTTGCTAAACAGTCAACGCATTTTCTTTCAAGATCATGTTAACCGGCATTCGATCCCAGTGGTGACTCCTGCTGTATTATCGATGgtaagaaataaagattggtagtagaatttatttagttgaacatgaccccaattgcacttctttcccgctaatattaaatatgttactagctattgatttg...

Basic information

species Zea mays
transcript GRMZM2G013607_T02
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|76293836|gb|DV033404.1|DV033404
EST:     ATGTTAACCGGCATTCGATCCCAGTGGTGACTCCTGCTGTATTATCGATG                         CGGAATGCCCTTTTGTCAACTGCAACAAGTGGTGATCTGGATGAAAGTAGT
genomic: ATGTTAACCGGCATTCGATCCCAGTGGTGACTCCTGCTGTATTATCGATGgtaagaaata ... tactttttagCGGAATGCCCTTTTGTCAACTGCAACAAGTGGTGATCAGGATGAAAGTAGT
EST: gi|60340656|gb|DN207629.1|DN207629
EST:     ATGTTAACCGGCATTCGATCCCAGTGGTGACTCCTGCTGTATTATCGATG                         CGGAATGCCCTTTTGTCAACTGCAACAAGTGGTGATCAGGATGAAAGTAGT
genomic: ATGTTAACCGGCATTCGATCCCAGTGGTGACTCCTGCTGTATTATCGATGgtaagaaata ... tactttttagCGGAATGCCCTTTTGTCAACTGCAACAAGTGGTGATCAGGATGAAAGTAGT
EST: gi|32943773|gb|CF048592.1|CF048592
EST:     ATGTTAACCGGCATTCGATCCCAGTGGTGACTCCTGCTGTATTATCGATG                         CGGAACGCCCTTTTGTCAACTGCAACAAGTGGTGATCAGGATGAAAGTAGT
genomic: ATGTTAACCGGCATTCGATCCCAGTGGTGACTCCTGCTGTATTATCGATGgtaagaaata ... tactttttagCGGAATGCCCTTTTGTCAACTGCAACAAGTGGTGATCAGGATGAAAGTAGT