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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGGACAAGCGCGCTCTGAAGCTTGCCAAGAGAAAGCTTGGAACTCACAAGAGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaattcgaaacttttgttgtgatacaaaactaaaatactgcttggtagcctgtcttgtcttatttttccttctgatgtctttgcatgtttaagt...

Basic information

species Zea mays
transcript GRMZM2G009936_T01
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G009936_T01 (Zea mays), 5'ss of exon 3
lower sequence: LOC_Os05g38520.2 (Oryza sativa), 5'ss of exon 3
AGGACAAGCGCGCTCTGAAGCTTGCCAAGAGAAAGCTTGGAACTCACAAGAGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaattcgaaacttttgttgtgatacaaaactaaaatactgcttggtagcctgtcttgtcttatttttccttctg-atgtctttgcat-gtttaagt
|||||||||| || |||||| | || |||||||||||||| || ||||||||||| |||||||||||||||||||||   || ||||||||||||||||||| |||||  |   | | ||  |    | ||     ||  || ||  | | || | ||||||   ||    ||   | ||    | ||   || |||| |  
AGGACAAGCGTGCACTGAAGGTGGCAAAGAGAAAGCTTGGCACCCACAAGAGGGCCAAGAAGAAGAGAGAGGAGATGGCTGGTGTCCTCAGGAAGATGAGgtgtgtaatcttccagccttgataaaaacacctg-ttattattctattggttaccttgtcttccgttgcaattgaatttgtgcctattaatattgtttgaa-

upper sequence: GRMZM2G009936_T01 (Zea mays), 5'ss of exon 3
lower sequence: GLYMA19G06460.2 (Glycine max), 5'ss of exon 3
AGGACAAGCGCGCTCTGAAGCTTGCCAAGAGAAAGCTTGGAACTCACAAGAGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaattcgaaacttttgttgtgatacaaaac-taaaatactgcttggtagcctgtcttgtcttatttttccttctgatgtct-ttgcatgtttaagt-----------------
| || ||| | || |||||  |||||||||||||||||||||| || ||| | ||||||||||||||||||||||||      || ||| |||||||||||||  |  ||       |||   | | || |  | | || |||    |||| | || | |       |   |||  |  | ||  || |||| | | | | |                 
AAGATAAGAGGGCACTGAAAGTTGCCAAGAGAAAGCTTGGAACCCATAAGCGCGCAAAGAAGAAGAGAGAGGAGATGTCCAATGTTCTCCGGAAGATGAGgttgctctatgttcttttttcaatattatgcgtaccctataattaatcttgttggcattttggaaagttgatttgttggtaataactattgcttatgttattttcttaattgtgtgtag

upper sequence: GRMZM2G009936_T01 (Zea mays), 5'ss of exon 3
lower sequence: GLYMA20G29980.1 (Glycine max), 5'ss of exon 3
AGGACAAGCGCGCTCTGAAGCTTGCCAAGAGAAAGCTTGGAACTCACAAGAGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaattcgaaacttttgttgtgatacaaaac-taaaatactgcttggtagcctgtcttgtcttattt----ttccttctgatgtc-tttgcatgtttaagt--
|||| ||| | || |||||| |||| ||||||||||| ||||| |||||  | |||||||||||| | ||||| |||    | || |||||||||||||||||      ||| |   | || |  | |||  |  | || ||||    ||   |  |||  | |   || ||    || ||| |||||   ||| ||| |||  |   
AGGATAAGAGGGCACTGAAGGTTGCAAAGAGAAAGCTCGGAACACACAAACGCGCAAAGAAGAAGCGTGAGGAAATGTCCAGTGTTCTCAGGAAGATGAGgtt-----gttctatgttcttttgttcatattatgcatacaatataatttataaatctgattggcagtagttgctattacttatgatgctgttttcatttttgtgcag

upper sequence: GRMZM2G009936_T01 (Zea mays), 5'ss of exon 3
lower sequence: GLYMA20G29990.3 (Glycine max), 5'ss of exon 3
AGGACAAGCGCGCTCTGAAGCTTGCCAAGAGAAAGCTTGGAACTCACAAGAGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtt--tgtaaattcgaaacttt-tgttgtg-atacaaaactaaaatactg-cttggtagcctgtcttgtcttatttttccttc-tgatgtctttgcatgtttaagt----------------------
|||| ||| | || |||||| |||| ||||||||||||||||| |||||  | |||||||||||| | ||||| |||    | || |||||||||||||||||  | ||  |||     ||  | || || ||||||   ||| |||    | || | | |  |||||  |  |  || |||  |  ||  |     |  ||| |                       
AGGATAAGAGGGCACTGAAGGTTGCAAAGAGAAAGCTTGGAACCCACAAACGTGCAAAGAAGAAGCGTGAGGAAATGTCCAGTGTTCTCAGGAAGATGAGgttgttctatgttcttttgttcatattatgcatacaatg-taatatataaacgtgattggcattcttgaatggtagtttcttggtagtggttgctattacttatgatgctgttttcatttttgtgcag

upper sequence: GRMZM2G009936_T01 (Zea mays), 5'ss of exon 3
lower sequence: AT2G37600.2 (Arabidopsis thaliana), 5'ss of exon 2
AGGACAAGCGCGCTCTGAAGCTTGCCAAGAGAAAGCTTGGAACTCACAAGAGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttg--taaattcgaaacttttgttgtgatacaaaa--------ctaaaatactgcttggtagcctgtcttgtcttattt-ttccttctgatgtctttgcatgtttaagt----------------------------------
| |||||||| ||||| ||| |||| ||||| ||| | || ||||||||||| || |||| ||||||||||||||||    | || ||| | |||||||||| |   |  |||  |  | ||| | |    |||| |         |   ||    || | | | || ||   |   ||   || ||  | ||||||  ||| ||| || |                                  
AAGACAAGCGTGCTCTTAAGGTTGCTAAGAGGAAGTTGGGTACTCACAAGAGAGCTAAGAGGAAGAGAGAGGAGATGTCTAGTGTTCTCCGCAAGATGAGgtattatttgatttcattcgtttttagcttcacaagagtttcaatttggcatttctctagatggtctatccatttgcatacatttctcttcatgtcta-gca-gttgaactatactaatttttcgactgtcttgaccacttgcag

upper sequence: GRMZM2G009936_T01 (Zea mays), 5'ss of exon 3
lower sequence: Vv16s0050g00610.t01 (Vitis vinifera), 5'ss of exon 3
AGGACAAGCGCGCTCTGAAGCTTGCCAAGAGAAAGCTTGGAACTCACAAGAGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgt---ttgtaaattcgaaacttttgttgtgat--acaaaactaaaatactgcttggta-gcctgtcttgtctt-----atttttccttctgatgtctt--tgcatgtttaagt----------------------------------------------------------------------------------
|||| ||||| || |||||  |||| ||||||||||| || |||||||||||||||||||||||| | |||||||||    | || ||| | ||||||||||   ||||||   |      ||| |  | ||     ||  |||||   |||||| |  |  ||  |||   |     ||  |    ||||| || ||  || ||  |||                                                                                     
AGGATAAGCGTGCACTGAAAGTTGCAAAGAGAAAGCTGGGTACTCACAAGAGGGCAAAGAAGAAGCGTGAGGAGATGTCTAGTGTTCTCCGCAAGATGAGgtaatttgtaataacatgctatttttcattatcagtgaatttaaaagtatgcttgttgtgtgtgaattgatattaaacatggtcatatctgaagttttgttgtatccttactgctgctatccaacgtaacttgaggatttggttttccaatttacccatacaattaaattcttgtttatggaatgttttatgtag

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211459788|gb|FL211161.1|FL211161
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211330292|gb|FL177683.1|FL177683
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|18181244|gb|BM382454.1|BM382454
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211459782|gb|FL211155.1|FL211155
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|166561722|gb|EG289716.1|EG289716
EST:     TCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: TCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|67017920|gb|CO446669.1|CO446669
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|32907413|gb|CF012226.1|CF012226
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|9794550|gb|BE552858.1|BE552858
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|32907669|gb|CF012482.1|CF012482
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|15313766|gb|BI478946.1|BI478946
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|61236448|gb|DN586201.1|DN586201
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|67012106|gb|CO440855.1|CO440855
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211332465|gb|FL177705.1|FL177705
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTKACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|32866126|gb|CF005808.1|CF005808
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGNCATGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|6742627|gb|AW313442.1|AW313442
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211305831|gb|FL092722.1|FL092722
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211459791|gb|FL211164.1|FL211164
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|8666101|gb|BE186917.1|BE186917
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211307850|gb|FL092728.1|FL092728
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211457268|gb|FL211152.1|FL211152
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|5650173|gb|AI920533.1|AI920533
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|6654178|gb|AW267583.1|AW267583
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211305823|gb|FL092714.1|FL092714
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211519525|gb|FL441901.1|FL441901
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|18179234|gb|BM380444.1|BM380444
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|32908944|gb|CF013757.1|CF013757
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|6654232|gb|AW267637.1|AW267637
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|113802272|gb|DW925525.1|DW925525
EST:     TCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: TCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|32917319|gb|CF022131.1|CF022131
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|38687496|gb|CK144527.1|CK144527
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|83278771|gb|DV942779.1|DV942779
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGGTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCACG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|32911562|gb|CF016374.1|CF016374
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211161340|gb|FL393724.1|FL393724
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211457269|gb|FL211153.1|FL211153
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACNAGAAGAAATAAAGCMTTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|78027281|gb|DV495668.1|DV495668
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211305828|gb|FL092719.1|FL092719
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211305826|gb|FL092717.1|FL092717
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211459790|gb|FL211163.1|FL211163
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|32908543|gb|CF013356.1|CF013356
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|193503544|gb|AM937733.1|AM937733
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|15056962|gb|BI360934.1|BI360934
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|4314723|gb|AI438635.2|AI438635
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGGTGGTACGCGCACTGGCAAGAAGAAATAAAGCCTTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|33090967|gb|CF050961.1|CF050961
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|31664095|gb|CD573275.1|CD573275
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|8930332|gb|BE225096.1|BE225096
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAA                         AACGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|32912606|gb|CF017418.1|CF017418
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|32911788|gb|CF016600.1|CF016600
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         GTCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|108953539|gb|EC364765.1|EC364765
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAA                         ATCGGCTGGTACGCACACTGACAAGCAAGAAATAAAGCATTTCCAGTTCAT
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAG-AAGAAATAAAGCATTTCAAGTTCAT
EST: gi|211307853|gb|FL092731.1|FL092731
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|26559572|gb|CA831807.1|CA831807
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211459783|gb|FL211156.1|FL211156
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|5757243|gb|AI964530.1|AI964530
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCCGGAAGATGAG                         ATCGGCTGGTACGCACCCTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|87157441|gb|DY402230.1|DY402230
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|4886046|gb|AI677166.1|AI677166
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211462306|gb|FL211169.1|FL211169
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|15215510|gb|BI431315.1|BI431315
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|32915112|gb|CF019924.1|CF019924
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|32911787|gb|CF016599.1|CF016599
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         GTCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|40337059|gb|CK371129.1|CK371129
EST:     GAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: GAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211226438|gb|FL431897.1|FL431897
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|60356261|gb|DN223234.1|DN223234
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211480151|gb|FL431176.1|FL431176
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|4776275|gb|AI665278.1|AI665278
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|37397800|gb|CF636208.1|CF636208
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211307854|gb|FL092732.1|FL092732
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|15554140|gb|BI644138.1|BI644138
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|37378045|gb|CF625677.1|CF625677
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211305833|gb|FL092724.1|FL092724
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|28569024|gb|CB280899.1|CB280899
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|6742321|gb|AW313136.1|AW313136
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         AAAAACTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211441558|gb|FL398429.1|FL398429
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|15198762|gb|BI423469.1|BI423469
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211462307|gb|FL211170.1|FL211170
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|58029751|gb|CX725178.1|CX725178
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211459795|gb|FL211168.1|FL211168
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|44681860|gb|CK786908.1|CK786908
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211459794|gb|FL211167.1|FL211167
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|16925814|gb|BM078882.1|BM078882
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|9952247|gb|BE638830.1|BE638830
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGGTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|32907103|gb|CF011916.1|CF011916
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211305822|gb|FL092713.1|FL092713
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211462308|gb|FL211171.1|FL211171
EST:     AGGGCAAAGAAGAAGAGAGAGGACACCATGGGCGTCCTCAAGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|32944166|gb|CF048985.1|CF048985
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211330298|gb|FL177689.1|FL177689
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|15499169|gb|BI595682.1|BI595682
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|32937383|gb|CF042202.1|CF042202
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCCCCCTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211459793|gb|FL211166.1|FL211166
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|32915423|gb|CF020235.1|CF020235
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|113701970|gb|EE679474.1|EE679474
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211305827|gb|FL092718.1|FL092718
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|9733536|gb|BE512168.1|BE512168
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211321619|gb|FL177626.1|FL177626
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|32936718|gb|CF041537.1|CF041537
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGCTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|60336735|gb|DN203708.1|DN203708
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|32936247|gb|CF041059.1|CF041059
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGCCAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211380555|gb|FL437250.1|FL437250
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|76281147|gb|DV020715.1|DV020715
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|58029940|gb|CX725367.1|CX725367
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|5058643|gb|AI737119.1|AI737119
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211521287|gb|FL400187.1|FL400187
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211305825|gb|FL092716.1|FL092716
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|15589959|gb|BI674575.1|BI674575
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211330295|gb|FL177686.1|FL177686
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211081572|gb|FL368304.1|FL368304
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCATGAATATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211307852|gb|FL092730.1|FL092730
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|67023763|gb|CO452512.1|CO452512
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|32909097|gb|CF013909.1|CF013909
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211321625|gb|FL177632.1|FL177632
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211323791|gb|FL177640.1|FL177640
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|32856146|gb|CD995827.1|CD995827
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|31611937|gb|CD568559.1|CD568559
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211521830|gb|FL420751.1|FL420751
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|211305834|gb|FL092725.1|FL092725
EST:     AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
EST: gi|6342638|gb|AW165462.1|AW165462
EST:     AGATGATGGGCGTCCTCAGGAAGATGAG                         ATCGGCTGGTCCGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG
genomic: AGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 601

AGGACAAGCGCGCTCTGAAGCTTGCCAAGAGAAAGCTTGGAACTCACAAGAGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATGAATGTGGCAGCCAGAGATTATCAACTGTGTTTTTTCCCTACCTCTAGAA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 738

AGGACAAGCGCGCTCTGAAGCTTGCCAAGAGAAAGCTTGGAACTCACAAGAGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATGAATGTGGCAGCCAGAGATTATCAACTGTGTTTTTTCCCTACCTCTAGAA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 767

AGGACAAGCGCGCTCTGAAGCTTGCCAAGAGAAAGCTTGGAACTCACAAGAGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATGAATGTGGCAGCCAGAGATTATCAACTGTGTTTTTTCCCTACCTCTAGAA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 381

AGGACAAGCGCGCTCTGAAGCTTGCCAAGAGAAAGCTTGGAACTCACAAGAGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaat ... ggatctgcagATCGGCTGGTACGCACACTGACAAGAAGAAATAAAGCATTTCAAGTTCATGAATGTGGCAGCCAGAGATTATCAACTGTGTTTTTTCCCTACCTCTAGAA


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
AGGACAAGCGCGCTCTGAAGCTTGCCAAGAGAAAGCTTGGAACTCACAAGAGGGCAAAGAAGAAGAGAGAGGAGATGATGGGCGTCCTCAGGAAGATGAGgtttgtaaattcgaaacttttgttgtgatacaaaactaaaatactgcttggtagcctgtcttgtcttatttttccttctgatgtctttgcatgtttaagt

- - - - - - - - - - - - - - - - - - - - - - - - - -  GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - -  AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aactaaaa