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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTGTGTGGCTGCAACTGTGAACCCATTTAACTTACATCAGATTGGCGGGGGCGATCTTCCTGATGACACTGTATTGACCTGCTCACGTGGTTTCGACAAgtaagctctttccctcatgtggccgtttttcttgtcttctgctgctgctgcttcctgatcatttcatagttgtttatggtggtctatcttttacaagatt...

Basic information

species Zea mays
transcript GRMZM2G009021_T03
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|78085122|gb|DV513515.1|DV513515
EST:     GGCGATCTTCCTGATGACACTGTATTGACCTGCTCACGTGGTTTCGACAA                         CGCACTGGAGTTTCTATCAACATGCAAGATTGCAAATCTGACTATTAGAGC
genomic: GGCGATCTTCCTGATGACACTGTATTGACCTGCTCACGTGGTTTCGACAAgtaagctctt ... tatcaaacagCGCACTGGAGTTTCTATCAACATGCAAGATTGCAAATCTGACTATTAGAGC
EST: gi|211120475|gb|FL454283.1|FL454283
EST:     CTGATGACACTGTATTGACCTGCTCACGTGGCTTCGACAA                         CGCACTGGAGTTTCTATCAACATGCAAGATTGCAAATCTGACTATTAGAGC
genomic: CTGATGACACTGTATTGACCTGCTCACGTGGTTTCGACAAgtaagctctt ... tatcaaacagCGCACTGGAGTTTCTATCAACATGCAAGATTGCAAATCTGACTATTAGAGC
EST: gi|78108725|gb|DV527143.1|DV527143
EST:     GGCGATCTTCCTGATGACACTGTATTGACCTGCTCACGTGGTTTCGACAA                         CGCACTGGAGTTTCTATCAACATGCAAGATTGCAAATCTGACTATTAGAGC
genomic: GGCGATCTTCCTGATGACACTGTATTGACCTGCTCACGTGGTTTCGACAAgtaagctctt ... tatcaaacagCGCACTGGAGTTTCTATCAACATGCAAGATTGCAAATCTGACTATTAGAGC