1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TCAGTGCACTCCCTGTATATGAGTGCACTCTTGAGGGTCTCCAAGCAGCATACTCAGGCAGCATGCCTTATGTCAAAGATGGTTTGGTGTTCTACAACAAgtaaaatccttatcccttttctttgaatatgttctagcaaatcacctcgacatatatatttgttaacttcatcaatcgaggattcatgactcataagaccttgtttttatcag
species | Zea mays |
transcript | GRMZM2G002361_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TACTCAGGCAGCATGCCTTATGTCAAAGATGGTTTGGTGTTCTACAACAA GCATGCACATTATCAAGCTGGAATCACACCTCTTGCCCTAGTATGGAAAGAEST: gi|149108582|gb|EE189724.2|EE189724
genomic: TACTCAGGCAGCATGCCTTATGTCAAAGATGGTTTGGTGTTCTACAACAAgtaaaatcct ... tttttatcagGCATGCACATTATCAAGCTGGAATCACACCTCTTGCCCTAGTATGGAAAGA
EST: TACTCAGGCAGCATGCCTTATGTCAAAGATGGTTTGGTGTTCTACAACAA GCATGCACATTATCAAGCTGGAATCACACCTCTTGCCCTAGTATGGAAAGA
genomic: TACTCAGGCAGCATGCCTTATGTCAAAGATGGTTTGGTGTTCTACAACAAgtaaaatcct ... tttttatcagGCATGCACATTATCAAGCTGGAATCACACCTCTTGCCCTAGTATGGAAAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCAGTGCACTCCCTGTATATGAGTGCACTCTTGAGGGTCTCCAAGCAGCATACTCAGGCAGCATGCCTTATGTCAAAGATGGTTTGGTGTTCTACAACAAgtaaaatccttatcccttttctttgaatatgttctagcaaatcacctcgacatatatatttgttaacttcatcaatcgaggattcatgactcataagaccttgtttttatcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG