1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ATTCCAGTGGAGAAGCTGCTAGTTCATGATGTGCCAGTTGACATTATCTGCACCCCTACTCAGGTCATCTTCACGAAGACTACGATCCCAAAGCCACAAGgttcggagatttttgtgtgcagtgatttcctctacgaattagtcttatgtgaccaaatattggagaattttatatgcag
species | Zea mays |
transcript | GRMZM2G001904_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CACCCCTACTCAGGTCATCTTCACGAAGACTACGATCCCAAAGCCACAAG GGATTTACTGGGAAAAGTTATCTCCAGAAAAATTGGGCCAAATCCGAATTCEST: gi|30031804|gb|CB833655.1|CB833655
genomic: CACCCCTACTCAGGTCATCTTCACGAAGACTACGATCCCAAAGCCACAAGgttcggagat ... ttatatgcagGGATTTACTGGGAAAAGTTATCTCCAGAAAAATTGGGCCAAATCCGAATTC
EST: CACCCCTACTCAGGTCATCTTCACGAAGACTACGATCCCAAAGCCACAAG GGATTTACTGGGAAAAGTTATCTCCAGAAAAATTGGGCCAAATCCGAATTCEST: gi|31558707|gb|CD527919.1|CD527919
genomic: CACCCCTACTCAGGTCATCTTCACGAAGACTACGATCCCAAAGCCACAAGgttcggagat ... ttatatgcagGGATTTACTGGGAAAAGTTATCTCCAGAAAAATTGGGCCAAATCCGAATTC
EST: CACCCCTACTCAGGTCATCTTCACGAAGACTACGATCCCAAAGCCACAAG GGATTTACTGGGAAAAGTTATCTCCAGAAAAATTGGGCCAAATCCGAATTCEST: gi|31558708|gb|CD527920.1|CD527920
genomic: CACCCCTACTCAGGTCATCTTCACGAAGACTACGATCCCAAAGCCACAAGgttcggagat ... ttatatgcagGGATTTACTGGGAAAAGTTATCTCCAGAAAAATTGGGCCAAATCCGAATTC
EST: CACCCCTACTCAGGTCATCTTCACGAAGACTACGATCCCAAAGCCACAAG GGATTTACTGGGAAAAGTTACCTCCAGAAAAATTGGGCCAAATCCGAATTC
genomic: CACCCCTACTCAGGTCATCTTCACGAAGACTACGATCCCAAAGCCACAAGgttcggagat ... ttatatgcagGGATTTACTGGGAAAAGTTATCTCCAGAAAAATTGGGCCAAATCCGAATTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTCCAGTGGAGAAGCTGCTAGTTCATGATGTGCCAGTTGACATTATCTGCACCCCTACTCAGGTCATCTTCACGAAGACTACGATCCCAAAGCCACAAGgttcggagatttttgtgtgcagtgatttcctctacgaattagtcttatgtgaccaaatattggagaattttatatgcag
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