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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTCACCTGGCAACCCACCTACTCCTGCTGGTTGTCGgtatgacaattcattaggtgatttttagcgctctcatatgattgacttttacaatagtccatgcggtgcttattggatttaccattctgattacattgtt...

Basic information

species Zea mays
transcript AC214168.3_FGT001
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: AC214168.3_FGT001 (Zea mays), 5'ss of exon 3
lower sequence: LOC_Os04g33950.1 (Oryza sativa), 5'ss of exon 3
GTTCACCTGGCAACCCACCTACTCCTGCTGGTTGTCGgtatgacaattcattaggtgatttttagcgctctcatatgattgacttttacaatagtccatgcggtgcttattggatttaccattctgattacattgtt-----------------------------------------------------------------------------------
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GTTCACCTGGAAATCCATCCACTCCTGCCAGTTCTCGCTATGACAATTCATTAGgtgatcat-agcagtccctcacctagaacttt--caattgtggaaatc-taaatgttaaatgtaccattatgaatttttggtgctttataaatgtagtcacatcatctcatttgatacagtttactctctttttaactgacagctattcatgtgatgtttgttcag