1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' | 26 5' 3' | 27 5' 3' | 28 5' 3' | 29 5' 3' | 30 5' 3' | 31 5' 3' | 32 5' 3' | 33 5' 3' | 34 5' 3' |
GTTGAGTTGTCTCATACCAATGCTGAGCTAAGATTACTTGAGGTCTTTTATCACAAGATATACAAGgtgctaagttggatttaattatgtactagtatgctttatgtatgtgctagttaggggcatgcaggcaaaaagagtataggctattgttatttaacctgtaatagttcctttag
species | Zea mays |
transcript | GRMZM5G864266_T01 |
intron # | 29 |
splice site | 5' |
intron type | U2 |
EST: CCAATGCTGAGCTAAGATTACTTGAGGTCTTTTATCACAAGATATACAAG GTATTTGCACCAAATGAAAAGATTGAAAACATCAATGATCAGTACTG-ACAEST: gi|78106266|gb|DV524684.1|DV524684
genomic: CCAATGCTGAGCTAAGATTACTTGAGGTCTTTTATCACAAGATATACAAGgtgctaagtt ... gttcctttagGTATTTGCACCAAATGAAAAGATTGAAAACATCAATGATCAGTACTGGACA
EST: CCAATGCTGAGCTAAGATTACTTGAGGTCTTTTATCACAAGATATACAAG GTATTTGCACCAAATGAAAAGATTGAAAACATCAATGATCAGTACTGGACAEST: gi|76909980|gb|DV163634.1|DV163634
genomic: CCAATGCTGAGCTAAGATTACTTGAGGTCTTTTATCACAAGATATACAAGgtgctaagtt ... gttcctttagGTATTTGCACCAAATGAAAAGATTGAAAACATCAATGATCAGTACTGGACA
EST: CCAATGCTGAGCTAAGATTACTTGAGGTCTTTTATCACAAGATATACAAG GTATTTGCACCAAATGAAAAGATTGAAAACATCAATGATCAGTACTGGACAEST: gi|60394863|gb|DN227732.1|DN227732
genomic: CCAATGCTGAGCTAAGATTACTTGAGGTCTTTTATCACAAGATATACAAGgtgctaagtt ... gttcctttagGTATTTGCACCAAATGAAAAGATTGAAAACATCAATGATCAGTACTGGACA
EST: CCAATGCTGAGCTAAGATTACTTGAGGTCTTTTATCACAAGATATACAAG GTATTTGCACCAAATGAAAAGATTGAAAACATCAATGATCAGTACTGGACAEST: gi|211394943|gb|FL031667.1|FL031667
genomic: CCAATGCTGAGCTAAGATTACTTGAGGTCTTTTATCACAAGATATACAAGgtgctaagtt ... gttcctttagGTATTTGCACCAAATGAAAAGATTGAAAACATCAATGATCAGTACTGGACA
EST: CCAATGCTGAGCTAAGATTACTTGAGGTCTTTTATCACAAGATATACAAG GTATTTGCACCAAATGAAAAGATTGARAACATCAATGATCAGTACTGGACAEST: gi|67020350|gb|CO449099.1|CO449099
genomic: CCAATGCTGAGCTAAGATTACTTGAGGTCTTTTATCACAAGATATACAAGgtgctaagtt ... gttcctttagGTATTTGCACCAAATGAAAAGATTGAAAACATCAATGATCAGTACTGGACA
EST: CCAATGCTGAGCTAAGATTACTTGAGGTCTTTTATCACAAGATATACAAG GTATTTGCACCAAATGAAAAGATTGAAAACATCAATGATCAGTACTGGACA
genomic: CCAATGCTGAGCTAAGATTACTTGAGGTCTTTTATCACAAGATATACAAGgtgctaagtt ... gttcctttagGTATTTGCACCAAATGAAAAGATTGAAAACATCAATGATCAGTACTGGACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGAGTTGTCTCATACCAATGCTGAGCTAAGATTACTTGAGGTCTTTTATCACAAGATATACAAGgtgctaagttggatttaattatgtactagtatgctttatgtatgtgctagttaggggcatgcaggcaaaaagagtataggctattgttatttaacctgtaatagttcctttag
- - - - - - - - - ATGCTG