1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' | 26 5' 3' | 27 5' 3' | 28 5' 3' | 29 5' 3' | 30 5' 3' |
GTGGTTGTTCATAGCATAAGACTTCCAAGAAACAGCACCATCAGTGACGTGATCACTGATTTGAAAACCAAGgtgatcacaaatctgtcactttacccagttacttagtttgtcctgaattgtaattgaatttgattgtgatgtttctgttggtctggtgcataataactatacctatttactataatatcttttttttatgttgaagcatgtctataattctcatcttaatgttcaacag
species | Zea mays |
transcript | GRMZM2G014805_T01 |
intron # | 25 |
splice site | 5' |
intron type | U2 |
EST: TTCCAAGAAACAGCACCATCAGTGATGTGATCACTGATTTGAAAACCAAG GTTGAACTATCAAATCCTGATACTGAGCTCCGCTTGCTTGAAGTATTTTACEST: gi|32934023|gb|CF038835.1|CF038835
genomic: TTCCAAGAAACAGCACCATCAGTGACGTGATCACTGATTTGAAAACCAAGgtgatcacaa ... tgttcaacagGTTGAACTATCAAATCCTGATACTGAGCTCCGCTTGCTTGAAGTATTTTAC
EST: TTCCAAGAAACAGCACCATCAGTGATGTGATCACTGATTTGAAAACCAAG GTTGAACTATCAAATCCTGATACTGAGCTCCGCTTGCTTGAAGTATTTTACEST: gi|60354119|gb|DN221092.1|DN221092
genomic: TTCCAAGAAACAGCACCATCAGTGACGTGATCACTGATTTGAAAACCAAGgtgatcacaa ... tgttcaacagGTTGAACTATCAAATCCTGATACTGAGCTCCGCTTGCTTGAAGTATTTTAC
EST: TTCCAAGAAACAGCACCATCAGTGACGTGATCACTGATTTGAAAACCAAG GTTGAACTATCAAATCCTGATACTGAGCTCCGCTTGCTTGAAGTATTTTACEST: gi|76019060|gb|DT946230.1|DT946230
genomic: TTCCAAGAAACAGCACCATCAGTGACGTGATCACTGATTTGAAAACCAAGgtgatcacaa ... tgttcaacagGTTGAACTATCAAATCCTGATACTGAGCTCCGCTTGCTTGAAGTATTTTAC
EST: TTCCAAGAAACAGCACCATCAGTGACGTGATCACTGATTTGAAAACCAAG GTTGAACTATCAAATCCTGATACTGAGCTCCGCTTGCTTGAAGTATTTTACEST: gi|13178629|gb|BG349887.1|BG349887
genomic: TTCCAAGAAACAGCACCATCAGTGACGTGATCACTGATTTGAAAACCAAGgtgatcacaa ... tgttcaacagGTTGAACTATCAAATCCTGATACTGAGCTCCGCTTGCTTGAAGTATTTTAC
EST: TTCCAAGAAACAGCACCATCAGTGACGTGATCACTGATTTGAAAACCAAG GTTGAACTATCAAATCCTGATACTGAGCTCCGCTTGCTTGAAGTATTTTACEST: gi|16378289|gb|BI992373.1|BI992373
genomic: TTCCAAGAAACAGCACCATCAGTGACGTGATCACTGATTTGAAAACCAAGgtgatcacaa ... tgttcaacagGTTGAACTATCAAATCCTGATACTGAGCTCCGCTTGCTTGAAGTATTTTAC
EST: TTCCAAGAAACAGCACCATCAGTGACGTGATCACTGATTTGAAAACCAAG GTTGAACTATCAAATCCTGATACTGAGCTCCGCTTGCTTGAAGTATTTTACEST: gi|94476779|gb|EB705737.1|EB705737
genomic: TTCCAAGAAACAGCACCATCAGTGACGTGATCACTGATTTGAAAACCAAGgtgatcacaa ... tgttcaacagGTTGAACTATCAAATCCTGATACTGAGCTCCGCTTGCTTGAAGTATTTTAC
EST: TTCCAAGAAACAGCACCATCAGTGACGTGATCACTGATTTGAAAACCAAG GTTGAACTATCAAATCCTGATACTGAGCTCCGCTTGCTTGAAGTATTTTAC
genomic: TTCCAAGAAACAGCACCATCAGTGACGTGATCACTGATTTGAAAACCAAGgtgatcacaa ... tgttcaacagGTTGAACTATCAAATCCTGATACTGAGCTCCGCTTGCTTGAAGTATTTTAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGGTTGTTCATAGCATAAGACTTCCAAGAAACAGCACCATCAGTGACGTGATCACTGATTTGAAAACCAAGgtgatcacaaatctgtcactttacccagttacttagtttgtcctgaattgtaattgaatttgattgtgatgtttctgttggtctggtgcataataactatacctatttactataatatcttttttttatgttgaagcatgtctataattctcatcttaatgttcaacag
- - - - - - - - - - - - - AAGAAA