Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|211468143|gb|FL353003.1|FL353003EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST:
gi|9566340|gb|BE475849.1|BE475849EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST:
gi|211302411|gb|FL241352.1|FL241352EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST:
gi|211541161|gb|FL236758.1|FL236758EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
EST:
gi|211422858|gb|FL241386.1|FL241386EST: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAG GAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
genomic: AGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcc ... tgttttgcagGAGGTGACCCTAGTGCATCTACAGCTGAGGCAAAGGAGCAGGTGGATGCCC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTGCAGGAGCTCGACGAGATGAAGCGCAGGCTGAAGGAGATGGAGGAGGAAGCCGCCGCCCTCCGCGATATGCAGGCCAAGGTCGCCAAGGAGATGCAAGgttgtcttcctatgtgctcacccaccttgcctttttgatgcttgataccttttttgcggtgtgtttaggtttcattattatggttcgatatgctatatac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG