1 5' 3' | 2 5' 3' | 3 5' 3' |
CTGTCAAATGCTGATATCTTGAAACCCAATCTAGTAGCACCCGGAAATTCGATTTGGGGTGCTTGGAGTTCACTTGGATTGGATTCTGCTGAATTTTCTGgtaattgcttctgttctcgaaatgttttatgaaacttttgtaaatggccttgtgaattgtaccaacatgtaaagttttgatcattctgtgttcttaacct...
species | Zea mays |
transcript | GRMZM5G837606_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GATTTGGGGTGCTTGGAGTTCACTTGGATTGGATTCTGCTGAATTTTCTG GTGAAAGTTTCGCGATGCTCTCTGGCACAAGTATGGCTGCACCCCATGTTGEST: gi|211148354|gb|FL363513.1|FL363513
genomic: GATTTGGGGTGCTTGGAGTTCACTTGGATTGGATTCTGCTGAATTTTCTGgtaattgctt ... tcccttgtagGTGAAAGTTTCGCGATGCTCTCTGGCACAAGTATGGCTGCACCCCATGTTG
EST: GATTTGGGGTGCTTGGAGTTCACTTGGATTGGATTCTGCTGAATTTTCTG GTGAAAGTTTCGCGATGCTCTCTGGCACAAGTATGGCTGCACCCCATGTTGEST: gi|50337873|gb|CO532999.1|CO532999
genomic: GATTTGGGGTGCTTGGAGTTCACTTGGATTGGATTCTGCTGAATTTTCTGgtaattgctt ... tcccttgtagGTGAAAGTTTCGCGATGCTCTCTGGCACAAGTATGGCTGCACCCCATGTTG
EST: GATTTGGGGTGCTTGGAGTTCACTTGGATTGGATTCTGCTGAATTTTCTG GTGAAAGTTTCGCGATGCTCTCTGGCACAAGTATGGCTGCACCCCATGTTGEST: gi|211446374|gb|FL309581.1|FL309581
genomic: GATTTGGGGTGCTTGGAGTTCACTTGGATTGGATTCTGCTGAATTTTCTGgtaattgctt ... tcccttgtagGTGAAAGTTTCGCGATGCTCTCTGGCACAAGTATGGCTGCACCCCATGTTG
EST: ATTTGGGGTGCTTGGAGTTCACTTGGATTGGATTCTGGCTGAATTTTCTG GTGAA-GTTTCGCGATGCTCTCTGGCACAAGTATGGCTGCACCCCATGTTG
genomic: ATTTGGGGTGCTTGGAGTTCACTTGGATTGGATTCTG-CTGAATTTTCTGgtaattgctt ... tcccttgtagGTGAAAGTTTCGCGATGCTCTCTGGCACAAGTATGGCTGCACCCCATGTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGTCAAATGCTGATATCTTGAAACCCAATCTAGTAGCACCCGGAAATTCGATTTGGGGTGCTTGGAGTTCACTTGGATTGGATTCTGCTGAATTTTCTGgtaattgcttctgttctcgaaatgttttatgaaacttttgtaaatggccttgtgaattgtaccaacatgtaaagttttgatcattctgtgttcttaacct
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