Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|76919504|gb|DV167745.1|DV167745EST: CAGTCACATTAGCCCTAAGAACTCGAAATGGCTCGCCGAAAATCTCGAAG AAATGGACAAGCAAGTGAAGGAAATGCTCCAGCTGATCGAGGAGGACGGCG
genomic: CAGTCACATTAGCCCTAAGAACTCGAAATGGCTCGCCGAAAATCTCGAAGgtaagcaaaa ... aaacatgcagAAATGGACAAGCAAGTGAAGGAAATGCTCCAGCTGATCGAGGAGGACGGCG
EST:
gi|74236729|gb|DT644643.1|DT644643EST: CAGTCACATTAGCCCTAAGAACTCGAAATGGCTCGCCGAAAATCTCGAAG AAATGGACAAGCAAGTGAAGGAAATGCTCCAGCTGATCGAGGAGGACGGCG
genomic: CAGTCACATTAGCCCTAAGAACTCGAAATGGCTCGCCGAAAATCTCGAAGgtaagcaaaa ... aaacatgcagAAATGGACAAGCAAGTGAAGGAAATGCTCCAGCTGATCGAGGAGGACGGCG
EST:
gi|78084697|gb|DV513090.1|DV513090EST: CAGTCACATTAGCCCTAAGAACTCGAAATGGCTCGCCGAAAATCTCGAAG AAATGGACAAGCAAGTGAAGGAAATGCTCCAGCTGATCGAGGAGGACGGCG
genomic: CAGTCACATTAGCCCTAAGAACTCGAAATGGCTCGCCGAAAATCTCGAAGgtaagcaaaa ... aaacatgcagAAATGGACAAGCAAGTGAAGGAAATGCTCCAGCTGATCGAGGAGGACGGCG
EST:
gi|166466764|gb|EG112048.1|EG112048EST: CAGTCACATTAGCCCTAAGAACTCGAAATGGCTCGCCGAAAATCTCGAAG AAATGGACAAGCAAGTGAAGGAAATGCTCCAGCTGATCGAGGAGGACGG
genomic: CAGTCACATTAGCCCTAAGAACTCGAAATGGCTCGCCGAAAATCTCGAAGgtaagcaaaa ... aaacatgcagAAATGGACAAGCAAGTGAAGGAAATGCTCCAGCTGATCGAGGAGGACGG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CCACCTCTCGAGAGGAACCCGACTAAGAAGCGCCACTCGTGGTGGTGGGACAGTCACATTAGCCCTAAGAACTCGAAATGGCTCGCCGAAAATCTCGAAGgtaagcaaaactacagccaatggatttgctactgttattatttttttttggctcaatgtgctatttcctggtacttggtactagtcatactatgtcaata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC