1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GGTTGTCTTCTGTCTGTTTGTTGCAAGGCATCTCATAAATGATTTCCCCGATAGCTGGGGAATCTCAGTGATGGTAGTAGTGGTTGTCTTCACTATTTATgtaagcactactgcatttctaattcacataattacaacttaccatgagcaattgattgttggccattacttctccctgaaagaacacttgtgcttcctta...
species | Zea mays |
transcript | GRMZM5G821611_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ATAGCTGGGGAATCTCAGTGATGGTAGTAGTGGTTGTCTTCACTATTTAT GATTTGACGTTGCTTCTTTGTACCTCTGGTAGAGATCCTGGTATAATACCCEST: gi|149089592|gb|EE178843.2|EE178843
genomic: ATAGCTGGGGAATCTCAGTGATGGTAGTAGTGGTTGTCTTCACTATTTATgtaagcacta ... cttttaccagGATTTGACGTTGCTTCTTTGTACCTCTGGTAGAGATCCTGGTATAATACCC
EST: ATAGCTGGGGAATCTCAGTGATGGTAGTAGTGGTTGTCTTCACTATTTAT GATTTGACGTTGCTTCTTTGTACCTCTGGTAGAGATCCTGGTATAATACCCEST: gi|89758330|gb|DY687546.1|DY687546
genomic: ATAGCTGGGGAATCTCAGTGATGGTAGTAGTGGTTGTCTTCACTATTTATgtaagcacta ... cttttaccagGATTTGACGTTGCTTCTTTGTACCTCTGGTAGAGATCCTGGTATAATACCC
EST: CTTCACTATTTAT GATTTGACGTTGCTTCTTTGTACCTCTGGTAGAGATCCTGGTATAATACCCEST: gi|149087864|gb|EE177142.2|EE177142
genomic: CTTCACTATTTATgtaagcacta ... cttttaccagGATTTGACGTTGCTTCTTTGTACCTCTGGTAGAGATCCTGGTATAATACCC
EST: ATAGCTGGGGAATCTCAGTGATGGTAGTAGTGGTTGTCTTCACTATTTAT GATTTGACGTTGCTTCTTTGTACCTCTGGTAGAGATCCTGGTATAATACCCEST: gi|71313270|gb|DR793166.1|DR793166
genomic: ATAGCTGGGGAATCTCAGTGATGGTAGTAGTGGTTGTCTTCACTATTTATgtaagcacta ... cttttaccagGATTTGACGTTGCTTCTTTGTACCTCTGGTAGAGATCCTGGTATAATACCC
EST: ATAGCTGGGGAATCTCAGTGATGGTAGTAGTGGTTGTCTTCACTATTTAT GATTTGACGTTGCTTCTTTGTACCTCTGGTAGAGATCCTGGTATAATACCCEST: gi|19350925|gb|BM895457.1|BM895457
genomic: ATAGCTGGGGAATCTCAGTGATGGTAGTAGTGGTTGTCTTCACTATTTATgtaagcacta ... cttttaccagGATTTGACGTTGCTTCTTTGTACCTCTGGTAGAGATCCTGGTATAATACCC
EST: ATAGCTGGGGAATCTCAGTGATGGTAGTATTGGTTGTCTTCACTATTTAT GATTTGACGTTGCTTCTTTGTACCTCTGGTAGAGATCCTGGTATAATACCC
genomic: ATAGCTGGGGAATCTCAGTGATGGTAGTAGTGGTTGTCTTCACTATTTATgtaagcacta ... cttttaccagGATTTGACGTTGCTTCTTTGTACCTCTGGTAGAGATCCTGGTATAATACCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTTGTCTTCTGTCTGTTTGTTGCAAGGCATCTCATAAATGATTTCCCCGATAGCTGGGGAATCTCAGTGATGGTAGTAGTGGTTGTCTTCACTATTTATgtaagcactactgcatttctaattcacataattacaacttaccatgagcaattgattgttggccattacttctccctgaaagaacacttgtgcttcctta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaagaaca