1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CGCGGACGATTGGAAGTTCGCGGCAGAGCAGTTTGTGAGGCGGATGCCGGACAAGGTGATCGTGCACCgtgagttacctgaccccattctgtaggctattccatttcatgctggattgttaaatgcagttgctcgctgagtcatggatagtagtgtgcgcgtgctgtg...
species | Zea mays |
transcript | GRMZM5G820727_T07 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CGCGGCAGAGCAGTTTGTGAGGCGGATGCCGGACAAGGTGATCGTGCACC GAAGTCAGTGCAACTCTGCCACTCAGACATTTGATGGTGTTGATTTAATGGEST: gi|78113514|gb|DV531905.1|DV531905
genomic: CGCGGCAGAGCAGTTTGTGAGGCGGATGCCGGACAAGGTGATCGTGCACCgtgagttacc ... ttttatgcagGAAGTCAGTGCAACTCTGCCACTCAGACATTTGATGGTGTTGATTTAATGG
EST: CGCGGCAGAGCAGTTTGTGAGGCGGATGCCGGACAAGGTGATCGTGCACC GAAGTCAGTGCAACTCTGCCACTCAGACATTTGATGGTGTTGATTTAATGGEST: gi|148942263|gb|EC887279.2|EC887279
genomic: CGCGGCAGAGCAGTTTGTGAGGCGGATGCCGGACAAGGTGATCGTGCACCgtgagttacc ... ttttatgcagGAAGTCAGTGCAACTCTGCCACTCAGACATTTGATGGTGTTGATTTAATGG
EST: CGCGGCAGAGCAGTTTGTGAGGCGGATGCCGGACAAGGTGATCGTGCACC GAAGTCAGTGCAACTCTGCCACTCAGACATTTGATGGTEST: gi|76020655|gb|DT947825.1|DT947825
genomic: CGCGGCAGAGCAGTTTGTGAGGCGGATGCCGGACAAGGTGATCGTGCACCgtgagttacc ... ttttatgcagGAAGTCAGTGCAACTCTGCCACTCAGACATTTGATGGT
EST: CGCGGCAGAGCAGTTTGTGAGGCGGATGCCGGACAAGGTGATCGTGCACC GAAGTCAGTGCAACTCTGCCACTCAGACATTTGATGGTGTTGATTTAATGGEST: gi|78090975|gb|DV519349.1|DV519349
genomic: CGCGGCAGAGCAGTTTGTGAGGCGGATGCCGGACAAGGTGATCGTGCACCgtgagttacc ... ttttatgcagGAAGTCAGTGCAACTCTGCCACTCAGACATTTGATGGTGTTGATTTAATGG
EST: CGCGGCAGAGCAGTTTGTGAGGCGGATGCCGGACAAGGTGATCGTGCACC GAAGTCAGTGCAACTCTGCCACTCAGACATTTGATGGTGTTGATTTAATGGEST: gi|78082075|gb|DV510487.1|DV510487
genomic: CGCGGCAGAGCAGTTTGTGAGGCGGATGCCGGACAAGGTGATCGTGCACCgtgagttacc ... ttttatgcagGAAGTCAGTGCAACTCTGCCACTCAGACATTTGATGGTGTTGATTTAATGG
EST: CGCGGCAGAGCAGTTTGTGAGGCGGATGCCGGACAAGGTGATCGTGCACC GAAGTCAGTGCAACTCTGCCACTCAGACATTTGATGGTGTTGATTTAATGGEST: gi|78106692|gb|DV525110.1|DV525110
genomic: CGCGGCAGAGCAGTTTGTGAGGCGGATGCCGGACAAGGTGATCGTGCACCgtgagttacc ... ttttatgcagGAAGTCAGTGCAACTCTGCCACTCAGACATTTGATGGTGTTGATTTAATGG
EST: CGCGGCAGAGCAGTTTGTGAGGCGGATGCCGGACAAGGTGATCGTGCACC GAAGTCAGTGCAACTCTGCCACTCAGACATTTGATGGTGTTGATTTAATGG
genomic: CGCGGCAGAGCAGTTTGTGAGGCGGATGCCGGACAAGGTGATCGTGCACCgtgagttacc ... ttttatgcagGAAGTCAGTGCAACTCTGCCACTCAGACATTTGATGGTGTTGATTTAATGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGCGGACGATTGGAAGTTCGCGGCAGAGCAGTTTGTGAGGCGGATGCCGGACAAGGTGATCGTGCACCgtgagttacctgaccccattctgtaggctattccatttcatgctggattgttaaatgcagttgctcgctgagtcatggatagtagtgtgcgcgtgctgtg
- - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - GAGCAG