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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTCCTGAAAACTTGCCACGCCACTTCGAAGTATCTGAAAAgtaagtgcctccctagcatgatgttggttggttaggtaattcgtcactgtggaaatcatggtttttctttcgtttcatctgccag

Basic information

species Zea mays
transcript GRMZM5G812228_T01
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|28909677|gb|CB331047.1|CB331047
EST:     CTCCTGAAAACTTGCCACGCCACTTCGAAGTATCTGAAAA                         CGGTCATAAGCTTTGGAGGAGTCACAAATGACCATAAAGATGAAGCTAAAA
genomic: CTCCTGAAAACTTGCCACGCCACTTCGAAGTATCTGAAAAgtaagtgcct ... catctgccagCGGTCATAAGCTTTGGAGGAGTCACAAATGACCATAAAGATGAAGCTAAAA