Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAACGAGTATGGATGGGCAAGAAATTTTCTTATATCTATGAAGGCAGGCCTAAGACAAACTCGGGTTTATTCATGCAGTCCCTCTTTCTGCATTGTATTGgtaggtgctggcttcctgaaagagcatatttctgaactgaatccacacttaccggtaatcctttttgtggtcacagctgaactattttccacttaattttatgtccag

Basic information

species Zea mays
transcript GRMZM2G701180_T03
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G701180_T02 (Zea mays), 5'ss of exon 2
lower sequence: LOC_Os10g35130.1 (Oryza sativa), 5'ss of exon 3
AAACGAGTATGGATGGGCAAGAAATTTTCTTATATCTATGAAGGCAGGCCTAAGACAAACTCGGGTTTATTCATGCAGTCCCTCTTTCTGCATTGTATTGgtaggtgctggcttcctgaaagagcatatttctgaactgaatccacacttaccggtaatcctttttgtggtcacagctgaactattttccacttaattttatgtccag
||  || | |||||||  |||||||||||||||||||||||||| || |||||||||||||| ||    ||||||||||| |||||| |||||||||||||||||  ||||||||||| ||         | || |||||   || ||  ||   |||||   ||||  ||||   |||| | ||||||   ||  |  ||| | |||
AAGAGATTGTGGATGGCAAAGAAATTTTCTTATATCTATGAAGGAAGACCTAAGACAAACTCTGGCGCTTTCATGCAGTCGCTCTTTTTGCATTGTATTGgtagg--ctggcttcctggaaa--------tttgcactga---catacccacaaataatc---tttggagtcatttctgatcaattttcacttttttactat-tacag