Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCGTTCCTGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgccagaggctgggtggattggcttgtgatgtctgctttggttcgttccatcgttggttgatttggtgtttgattggttgaaag

Basic information

species Zea mays
transcript GRMZM2G520535_T01
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G520535_T01 (Zea mays), 5'ss of exon 2
lower sequence: LOC_Os10g27340.2 (Oryza sativa), 5'ss of exon 2
GGCGTTCCTGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgccagaggctgggtggattggcttgtgatgtctgctttggttcgttccatcgttggttgatttggtgtttgattggttgaaag
|||||||||||||||||| |||||| |||| ||||||||||| ||||| ||| ||||||||||||    |  ||| |       ||| |   |  | || || |      |  |   ||| | ||   |  ||   | | ||   ||
GGCGTTCCTGCACAAGGGGTTCCTGACGGACGCGGAGTGCGAGCACCTGATCTCGCTGgtgagtgt---acactgtggcatcccgctcgatctcgccgcattcggggaaccttt---tgggtaatagtggattgattcgatttgtag
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|74236044|gb|DT643958.1|DT643958
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|31360260|gb|CD444617.1|CD444617
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|211451195|gb|FL002405.1|FL002405
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|211449078|gb|FL002398.1|FL002398
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|37424402|gb|CF649933.1|CF649933
EST:     TGCACAAGGGTTTTCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAACGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAG
EST: gi|211449073|gb|FL002393.1|FL002393
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|7958433|gb|AW862735.1|AW862735
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|211449076|gb|FL002396.1|FL002396
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|211446954|gb|FL002385.1|FL002385
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|211451194|gb|FL002404.1|FL002404
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|211449074|gb|FL002394.1|FL002394
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|211039974|gb|FL073405.1|FL073405
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|149014492|gb|EE044118.2|EE044118
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|211446952|gb|FL002383.1|FL002383
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|7844161|gb|AW787383.1|AW787383
EST:     GGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: GGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|211446953|gb|FL002384.1|FL002384
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|71320428|gb|DR796958.1|DR796958
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|211446956|gb|FL002387.1|FL002387
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|211449082|gb|FL002402.1|FL002402
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|211039976|gb|FL073407.1|FL073407
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|7844162|gb|AW787384.1|AW787384
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|148951226|gb|EC896920.2|EC896920
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|211446955|gb|FL002386.1|FL002386
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|76019346|gb|DT946516.1|DT946516
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|32866419|gb|CF006101.1|CF006101
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|211449068|gb|FL002388.1|FL002388
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|71328190|gb|DR800733.1|DR800733
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|211449072|gb|FL002392.1|FL002392
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|71442480|gb|DR823530.1|DR823530
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|31353117|gb|CD437474.1|CD437474
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|78180250|gb|DV550623.1|DV550623
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|211039973|gb|FL073404.1|FL073404
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|211039977|gb|FL073408.1|FL073408
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGAGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGAGGACGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|211039972|gb|FL073403.1|FL073403
EST:     GCACAAGGGTTTCCTGTCGGAATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: GCACAAGGGTTTCCTGTCGGA-TGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|89250537|gb|DY622323.1|DY622323
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|76287083|gb|DV026651.1|DV026651
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|211449075|gb|FL002395.1|FL002395
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
EST: gi|74236045|gb|DT643959.1|DT643959
EST:     TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTG                         GCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG
genomic: TGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 47 (upstream exon), 49 (downstream exon)
Score: 175

GGCGTTCCTGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAGAGTGTCCAGAGTGAGGTGCGCACCAGCTCCGGCATGTTCCTCGAGAGGA


Block sizes: 48 (upstream exon), 49 (downstream exon)
Score: 76

GGCGTTCCTGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAGAGTGTCCAGAGTGAGGTGCGCACCAGCTCCGGCATGTTCCTCGAGAGGA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 88

GGCGTTCCTGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAGAGTGTCCAGAGTGAGGTGCGCACCAGCTCCGGCATGTTCCTCGAGAGGA


Block sizes: 48 (upstream exon), 49 (downstream exon)
Score: 111

GGCGTTCCTGCACAAGGGTTTCCTGTCGGATGCGGAGTGCGACCACCTCATCGCGCTGgtgagtgcca ... tggttgaaagGCCAAGGACAAGCTGGAGAAGTCTATGGTGGCCGATAACGAGTCCGGTAAGAGTGTCCAGAGTGAGGTGCGCACCAGCTCCGGCATGTTCCTCGAGAGGA