1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GCCGGACCTGCTGGAGAGGCTGACGGCCATGGCGGCGAAGCTGGACGCGCGCCCGCCGGGCCGCCACGGGCCGCGCGACCCGGAGCTGGACCAGTTCATGgtcggtaatccacacagctagctactttgccgcgcccttccttcgtttcgttttgctaacctcgtctctctctctctctctctctctctctgccaatcgcatcacatcgcatgtggtcgccggcgcggcgtgcag
species | Zea mays |
transcript | GRMZM2G452178_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GCCCGCCGGGCCGCCACGGGCCGCGCGACCCGGAGCTGGACCAGTTCATG GAGGCGTACTGCAACATGCTCGTCAAGTACCGGGAGGAGCTGACCCGGCCGEST: gi|149098338|gb|EE184311.2|EE184311
genomic: GCCCGCCGGGCCGCCACGGGCCGCGCGACCCGGAGCTGGACCAGTTCATGgtcggtaatc ... cggcgtgcagGAGGCGTACTGCAACATGCTCGTCAAGTACCGGGAGGAGCTGACCCGGCCG
EST: GCCCGCCGGGCCGCCACGGGCCGCGCGACCCGGAGCTGGACCAGTTCATG GAGGCGTACTGCAACATGCTCGTCAAGTACCGEST: gi|149098337|gb|EE184310.2|EE184310
genomic: GCCCGCCGGGCCGCCACGGGCCGCGCGACCCGGAGCTGGACCAGTTCATGgtcggtaatc ... cggcgtgcagGAGGCGTACTGCAACATGCTCGTCAAGTACCG
EST: GCCCGCCGGGCCGCCACGGGCCGCGCGACCCGGAGCTGGACCAGTTCATG GAGGCGTACTGCAACATGCTCGTCAAGTACCGGGAGGAGCTGACCCGGCCGEST: gi|93017531|gb|EB643051.1|EB643051
genomic: GCCCGCCGGGCCGCCACGGGCCGCGCGACCCGGAGCTGGACCAGTTCATGgtcggtaatc ... cggcgtgcagGAGGCGTACTGCAACATGCTCGTCAAGTACCGGGAGGAGCTGACCCGGCCG
EST: GCCCGCCGGGCCGCCACGGGCCGCGCGACCCGGAGCTGGACCAGTTCATG GAGGCGTACTGCAACATGCTCGTCAAGTACCGGGAGGAGCTGACCCGGCCGEST: gi|74233805|gb|DT641719.1|DT641719
genomic: GCCCGCCGGGCCGCCACGGGCCGCGCGACCCGGAGCTGGACCAGTTCATGgtcggtaatc ... cggcgtgcagGAGGCGTACTGCAACATGCTCGTCAAGTACCGGGAGGAGCTGACCCGGCCG
EST: GCCCGCCGGGCCGCCACGGGCCGCGCGACCCGGAGCTGGACCAGTTCATG GAGGCGTACTGCAACATGCTCGTCAAGTACCGGGAGGAGCTGACCCGGCCGEST: gi|149101175|gb|EE187285.2|EE187285
genomic: GCCCGCCGGGCCGCCACGGGCCGCGCGACCCGGAGCTGGACCAGTTCATGgtcggtaatc ... cggcgtgcagGAGGCGTACTGCAACATGCTCGTCAAGTACCGGGAGGAGCTGACCCGGCCG
EST: GCCCGCCGGGCCGCCACGGGCCGCGCGACCCGGAGCTGGACCAGTTCATG GAGGCGTACTGCAACATGCTCGTCAAGTACCGGGAGGAGCTGACCCGGCCGEST: gi|149101176|gb|EE187286.2|EE187286
genomic: GCCCGCCGGGCCGCCACGGGCCGCGCGACCCGGAGCTGGACCAGTTCATGgtcggtaatc ... cggcgtgcagGAGGCGTACTGCAACATGCTCGTCAAGTACCGGGAGGAGCTGACCCGGCCG
EST: GCCCGCCGGGCCGCCACGGGCCGCGCGACCCGGAGCTGGACCAGTTCATG GAGGCGTACTGCAACATGCTCGTCAAGTACCGGGAGGAGCTGACCCGGCCG
genomic: GCCCGCCGGGCCGCCACGGGCCGCGCGACCCGGAGCTGGACCAGTTCATGgtcggtaatc ... cggcgtgcagGAGGCGTACTGCAACATGCTCGTCAAGTACCGGGAGGAGCTGACCCGGCCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCGGACCTGCTGGAGAGGCTGACGGCCATGGCGGCGAAGCTGGACGCGCGCCCGCCGGGCCGCCACGGGCCGCGCGACCCGGAGCTGGACCAGTTCATGgtcggtaatccacacagctagctactttgccgcgcccttccttcgtttcgttttgctaacctcgtctctctctctctctctctctctctctgccaatcgcatcacatcgcatgtggtcgccggcgcggcgtgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA