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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATGACATTAAGGTCTTCGCCGCGGTGCCGTCGAAGCCTGGCGCTGAGTTTCCTAATGCCGCCCGCTGGTACGAGACCGTCTCTGCGGCTGTAGCCTCAAGgttcgatttgtttctctaattgcaaatttataggtgtagtgggttgatgtctttcactggccgcaggttttatttatttcactgattgcacatttgtaag...

Basic information

species Zea mays
transcript GRMZM2G439201_T04
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211052343|gb|FL324082.1|FL324082
EST:     CCTAATGCCGCCCGCTGGTACGAGACCGTCTCTGCGGCTGTAGCCTCAAG                         GNTGAGGACGATGATGACCTTGATCTTTTTGGNGATGAAACTGAGGAGGAC
genomic: CCTAATGCCGCCCGCTGGTACGAGACCGTCTCTGCGGCTGTAGCCTCAAGgttcgatttg ... ttctcgacagGCTGAGGACGATGATGACCTTGATCTTTTTGGTGATGAAACTGAGGAGGAC
EST: gi|211433428|gb|FL362818.1|FL362818
EST:     CCTAATGCCGCCCGCTGGTACGAGACCGTCTCTGCGGCTGTAGCCTCAAG                         GCTGAGGACGATGATGACCTTGATCTTTTTGGTGATGAAACTGAGGAGGAC
genomic: CCTAATGCCGCCCGCTGGTACGAGACCGTCTCTGCGGCTGTAGCCTCAAGgttcgatttg ... ttctcgacagGCTGAGGACGATGATGACCTTGATCTTTTTGGTGATGAAACTGAGGAGGAC
EST: gi|211113426|gb|FL350255.1|FL350255
EST:     CCTAATGCCGCCCGCTGGTACGAGACCGTCTCTGCGGCTGTAGCCTCAAG                         GCTGAGGACGATGATGACCTTGATCTTTTTGGTGATGAAACTGAGGAGGAC
genomic: CCTAATGCCGCCCGCTGGTACGAGACCGTCTCTGCGGCTGTAGCCTCAAGgttcgatttg ... ttctcgacagGCTGAGGACGATGATGACCTTGATCTTTTTGGTGATGAAACTGAGGAGGAC
EST: gi|211383057|gb|FL320865.1|FL320865
EST:     CCTAATGCCGCCCGCTGGTACGAGACCGTCTCTGCGGCTGTAGCCTCAAG                         GCTGAGGACGATGATGACCTTGATCTTTTTGGTGATGAAACTGAGGAGGAC
genomic: CCTAATGCCGCCCGCTGGTACGAGACCGTCTCTGCGGCTGTAGCCTCAAGgttcgatttg ... ttctcgacagGCTGAGGACGATGATGACCTTGATCTTTTTGGTGATGAAACTGAGGAGGAC