1 5' 3' | 2 5' 3' | 3 5' 3' |
CCCCAAAGACGACGGCAGCTTGGCGACGTTCGTGGGGTTCCGCGTGCAGCATGATAACGCCCGCGGGCCGATGAAAGGCGGCATCCGCTATCACAATGAGgtgagggatcgattctgttctgtctattgtgtgtgctcttccagaaatacaaataatgcagcaattgtaaagcaggcatgttttggctgtggtcactttt...
species | Zea mays |
transcript | GRMZM2G427097_T02 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ATGACAACGCCCGCGGGCCGATGAAAGGCGGCATCCGCTATCACAATGAG GTTGATCCAGATGAAGTAAATGCCCTTGCTCAACTCATGACATGGAAGACAEST: gi|18661831|gb|BM501601.1|BM501601
genomic: ATGATAACGCCCGCGGGCCGATGAAAGGCGGCATCCGCTATCACAATGAGgtgagggatc ... tgtcgggcagGTTGATCCAGATGAAGTAAATGCCCTTGCTCAACTCATGACATGGAAGACA
EST: ATGACAACGCCCGCGGGCCGATGAAAGGCGGCATCCGCTATCACAATGAG GTTGATCCAGATGAAGTAAATGCCCTTGCTCAACTCATGACATGGAAGACA
genomic: ATGATAACGCCCGCGGGCCGATGAAAGGCGGCATCCGCTATCACAATGAGgtgagggatc ... tgtcgggcagGTTGATCCAGATGAAGTAAATGCCCTTGCTCAACTCATGACATGGAAGACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCCCAAAGACGACGGCAGCTTGGCGACGTTCGTGGGGTTCCGCGTGCAGCATGATAACGCCCGCGGGCCGATGAAAGGCGGCATCCGCTATCACAATGAGgtgagggatcgattctgttctgtctattgtgtgtgctcttccagaaatacaaataatgcagcaattgtaaagcaggcatgttttggctgtggtcactttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaatacaa