Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|211005775|gb|FL390293.1|FL390293EST: AGGCATCACGCCGGAAGAGTTCCGCCTCATCAAGATCCATATGTCGTTCC ATATCTGGAGGCTAGCACAGCAGGTTAAAGTTAGGCAAAGGTTAGGCCTTG
genomic: AGGCATCACGCCGGAAGAGTTCCGCCTCATCAAGATCCATATGTCGTTCCgtgagctcct ... atgatttcagATATCTGGAGGCTAGCACAGCAGGTTAAAGTTAGGCAAAGGTTAGGCCTTG
EST:
gi|93282134|gb|EB674398.1|EB674398EST: AGGCATCACGCCGGAAGAGTTCCGCCTCATCAAGATCCATATGTCGTTCC ATATCTGGAGGCTAGCACAGCAGGTTAAAGTTAGGCAAAGGTTAGGCCTTG
genomic: AGGCATCACGCCGGAAGAGTTCCGCCTCATCAAGATCCATATGTCGTTCCgtgagctcct ... atgatttcagATATCTGGAGGCTAGCACAGCAGGTTAAAGTTAGGCAAAGGTTAGGCCTTG
EST:
gi|31612261|gb|CD568883.1|CD568883EST: AGGCATCACGCCGGAAGAGTTCCGCCTCATCAAGATCCATATGTCGTTCC ATATCTGGAGGCTAGCACAGCAGGTTAAAGTTAGGCAAAGGTTAGGCCTTG
genomic: AGGCATCACGCCGGAAGAGTTCCGCCTCATCAAGATCCATATGTCGTTCCgtgagctcct ... atgatttcagATATCTGGAGGCTAGCACAGCAGGTTAAAGTTAGGCAAAGGTTAGGCCTTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTGCTGGACCCCGAGGACGTGGACCTGGTGCCGGCGGCGGACCGGGAGCGAGGCATCACGCCGGAAGAGTTCCGCCTCATCAAGATCCATATGTCGTTCCgtgagctcctatcctcgctagtcttttcctgacaccttgcattatcatttcccgatgtgaatcagctttagattctacactgcttctgtattgtgcacta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA