1 5' 3' | 2 5' 3' | 3 5' 3' |
GGACGCGCTTGACGGGGATACCATTGATGTGCTCTATCTGGACAACACCTACTGCCACCCATCGCTCAACTTCCCTCCACGCCCCGTCGTCGCTGAGCAGgtcagtttcgcttagacacaagcgtggttgttatgccaatttgtgtcttcgcgtaatggttgagtttaccgctgatgatgaccttatcgaaacatcattt...
species | Zea mays |
transcript | GRMZM2G404056_T03 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ACTGCCACCCATCGCTCAACTTCCCTCCACGCCCCGTCGTCGCTGAGCAG GTGATTGATATTATTCGGTCACATCCTGATCACGAAGTTATCATTGGTGTTEST: gi|78117402|gb|DV535789.1|DV535789
genomic: ACTGCCACCCATCGCTCAACTTCCCTCCACGCCCCGTCGTCGCTGAGCAGgtcagtttcg ... ttatatgcagGTGATTGATATTATTCGGTCACATCCTGATCACGAAGTTATCATTGGTGTT
EST: ACTGCCACCCATCGCTCAACTTCCCTCCACGCCCCGTCGTCGCTGAGCAG GTGATTGATATTATTCGGTCACATCCTGATCACGAAGTTATCATTGGTGTTEST: gi|78084427|gb|DV512820.1|DV512820
genomic: ACTGCCACCCATCGCTCAACTTCCCTCCACGCCCCGTCGTCGCTGAGCAGgtcagtttcg ... ttatatgcagGTGATTGATATTATTCGGTCACATCCTGATCACGAAGTTATCATTGGTGTT
EST: ACTGCCACCCATCGCTCAACTTCCCTCCACGCCCCGTCGTCGCTGAGCAG GTGATTGATATTATTCGGTCACATCCTGATCACGAAGTTATCATTGGTGTTEST: gi|78079300|gb|DV507712.1|DV507712
genomic: ACTGCCACCCATCGCTCAACTTCCCTCCACGCCCCGTCGTCGCTGAGCAGgtcagtttcg ... ttatatgcagGTGATTGATATTATTCGGTCACATCCTGATCACGAAGTTATCATTGGTGTT
EST: ACTGCCACCCATCGCTCAACTTCCCTCCACGCCCCGTCGTCGCTGAGCAG GTGATTGATATTATTCGGTCACATCCTGATCACGAAGTTATCATTGGTGTTEST: gi|76013943|gb|DT941113.1|DT941113
genomic: ACTGCCACCCATCGCTCAACTTCCCTCCACGCCCCGTCGTCGCTGAGCAGgtcagtttcg ... ttatatgcagGTGATTGATATTATTCGGTCACATCCTGATCACGAAGTTATCATTGGTGTT
EST: ACTGCCACCCATCGCTCAACTTCCCTCCACGCCCCGTCGTCGCTGAGCAG GTGATTGATATTATTCGGTCACATCCTGATCACGAAGTTATCATTGGTGTT
genomic: ACTGCCACCCATCGCTCAACTTCCCTCCACGCCCCGTCGTCGCTGAGCAGgtcagtttcg ... ttatatgcagGTGATTGATATTATTCGGTCACATCCTGATCACGAAGTTATCATTGGTGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGACGCGCTTGACGGGGATACCATTGATGTGCTCTATCTGGACAACACCTACTGCCACCCATCGCTCAACTTCCCTCCACGCCCCGTCGTCGCTGAGCAGgtcagtttcgcttagacacaagcgtggttgttatgccaatttgtgtcttcgcgtaatggttgagtttaccgctgatgatgaccttatcgaaacatcattt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG