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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTCAGCTGCAACAAAACTAACCATGGATGGCACTAGCTTTGACCTGACAGAGCACGAAGGTTCAAATTTGTCTCCTTTTCTACTCAAACTTTTTAATGAGgtttgtaacttttacatgtcttagacacatcatttctgcattacaattatgatttgtatcgaaagaaatgctagttgaagtataaacatgaacggtcattgcag

Basic information

species Zea mays
transcript GRMZM2G359397_T03
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|31353662|gb|CD438019.1|CD438019
EST:     AGCACGAAGGTTCAAATCTGTCTCCGTTTCTACTCAAACTTTTTAATGAG                         TGGGATGATCGCAAGACAAGGGGCTTGTTTCACCATGACATCAGTTCCTGT
genomic: AGCACGAAGGTTCAAATTTGTCTCCTTTTCTACTCAAACTTTTTAATGAGgtttgtaact ... gtcattgcagTGGGATGATCGCAAGACAAGGGGCTTGTTTCACCATGACATCAGTTCCTGT
EST: gi|31364673|gb|CD449028.1|CD449028
EST:     AGCACGAAGGTTCAAATCTGTCTCCGTTTCTACTCAAACTTTTTAATGAG                         TGGGATGATCGCAAGACAAGGGGCTTGTTTCACCATGACATCAGTTCCTGT
genomic: AGCACGAAGGTTCAAATTTGTCTCCTTTTCTACTCAAACTTTTTAATGAGgtttgtaact ... gtcattgcagTGGGATGATCGCAAGACAAGGGGCTTGTTTCACCATGACATCAGTTCCTGT
EST: gi|78119881|gb|DV538265.1|DV538265
EST:     AGCACGAAGGTTCAAATTTGTCTCCTTTTCTACTCAAACTTTTTAATGAG                         TGGGATGATCGCAAGACAAGGGGCTTGTTTCACCATGACATCAGTTCCTGT
genomic: AGCACGAAGGTTCAAATTTGTCTCCTTTTCTACTCAAACTTTTTAATGAGgtttgtaact ... gtcattgcagTGGGATGATCGCAAGACAAGGGGCTTGTTTCACCATGACATCAGTTCCTGT
EST: gi|93283884|gb|EB676148.1|EB676148
EST:     AGCACGAAGGTTCAAATTTGTCTCCTTTTCTACTCAAACTTTTTAATGAG                         TGGGATGATCGCAAGACAAGGGGCTTGTTTCACCATGACATCAGTTCCTGT
genomic: AGCACGAAGGTTCAAATTTGTCTCCTTTTCTACTCAAACTTTTTAATGAGgtttgtaact ... gtcattgcagTGGGATGATCGCAAGACAAGGGGCTTGTTTCACCATGACATCAGTTCCTGT