Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   		13  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAAGTCGGTGGGTCAAGTCCGAGTGGAAGAAGGATGAGAACATGGCTGGTGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattccaaaacatcagaagattggtggtttcagtttatttatgagttactcaacacgtttcttgttgcag

Basic information

species Zea mays
transcript GRMZM2G358059_T01
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G358059_T01 (Zea mays), 5'ss of exon 2
lower sequence: LOC_Os07g14270.2 (Oryza sativa), 5'ss of exon 2
GAAAGTCGGTGGGTCAAGTCCGAGTGGAAGAAGGATGAGAACATGGCTGGTGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattccaaaacatcagaagattggtggtttcagtttatttatgagt--tactcaac-acgtttcttgttgcag
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| || || || |||||||||||| | |||||||||||||||||    || ||||  | |              | |   |||| |  |||| ||  |  |||||||||||||
GAAAGTCGGTGGGTCAAGTCAGAATGGAAGAAGGATGAGAACATGGCTGGTGAATGGAACCACACATCTGGGAAGTGGAATGGAGATCCTGAGGACAAAGgtaaatt--ggaagatcaatacacctcattcagacactaacagatgatttttactgaattatttttcttgttgcag

upper sequence: GRMZM2G358059_T01 (Zea mays), 5'ss of exon 2
lower sequence: GLYMA20G23080.2 (Glycine max), 5'ss of exon 2
GAAAGTCGGTGGGTCAAGTCCGAGTGGAAGAAGGATGAGAACATGGCTGGTGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaatt---ccaaaacatcagaagattggtggtttcagtttatttatga--gttactcaacacgtttcttgttgcag-------------------------------------
| || ||| ||||| || || || ||||| || ||||||||| ||||||| || |||||||||||||| ||  ||||||||||||| ||  | |||||||||||| |        | ||   |   |      ||     ||  | |||    ||  |    |   ||  | ||                                         
GGAAATCGTTGGGTTAAATCAGATTGGAAAAAAGATGAGAACCTGGCTGGGGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaattgctatattgaacagtcttgtattatttcttgctcatgtttatttttggctaaaattgatattaagatatgtttgtttttggctgaatgttgatatctatgcag

upper sequence: GRMZM2G358059_T01 (Zea mays), 5'ss of exon 2
lower sequence: GLYMA10G28890.1 (Glycine max), 5'ss of exon 2
GAAAGTCGGTGGGTCAAGTCCGAGTGGAAGAAGGATGAGAACATGGCTGGTGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattccaaaacatcagaagattggtggtttcagtttatttatgagttactcaacacgtttcttgttgcag--------------------------------------------
|||| ||| ||||| || || || ||||| || ||||||||| ||||||| || |||||||||||||| ||  ||||||||||||| ||  | |||||||||||| |  |   |        || |  || |    |    ||||  ||| ||||       | |||||  |                                             
GAAAATCGATGGGTTAAATCAGATTGGAAAAAAGATGAGAACGTGGCTGGGGAGTGGAACCACACCTCTGGTCAATGGAATGGAGACGCTAATGACAAAGgtaaactaaattgctatgttgaatagtcgggtattatactattatt-gttgctcatgtttacttttgtttaaaattgatattaagatatgtttggttgaatgttgatatctctgcag

upper sequence: GRMZM2G358059_T01 (Zea mays), 5'ss of exon 2
lower sequence: Vv14s0060g01290.t01 (Vitis vinifera), 5'ss of exon 2
GAAAGTCGGTGGGTCAAGTCCGAGTGGAAGAAGGATGAGAACATGGCTGGTGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgta--aattccaaa-acatcagaaga-----ttggtg----gtttcagtttatttatgagtt---actc---aacacgtttcttgttgcag--------------------
|| | |  |||||| || ||||| |||||||| ||||||||||||||||| ||||||||| ||||||| || |||||| |||||||  |  | || |||||||  | || || | ||||    | |     |||| |    |||||| | | ||||| | ||   |||    ||   ||  |||| |                        
GAGAATAAGTGGGTTAAATCCGAATGGAAGAAAGATGAGAACATGGCTGGGGAATGGAACTACACCTCTGGTAAATGGCATGGAGACCCGAATGATAAAGgtattattttcatacacattcttatacctatttggggcaatgtttcattctctttattaatttggactttgaaatgtgtaacttgatttgacttcaatggtctggatatag

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211330017|gb|FL047760.1|FL047760
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGGTTCTATGCCATTTCAGCCGAATAC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGG-TTCTATGCCATTTCAGCCGAATAC
EST: gi|211334353|gb|FL047792.1|FL047792
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211423574|gb|FL047828.1|FL047828
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211439181|gb|FL047919.1|FL047919
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211428795|gb|FL047872.1|FL047872
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|60347982|gb|DN214955.1|DN214955
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211423580|gb|FL047834.1|FL047834
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211327850|gb|FL047739.1|FL047739
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211433991|gb|FL047895.1|FL047895
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211431384|gb|FL047874.1|FL047874
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211426195|gb|FL047847.1|FL047847
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211426194|gb|FL047846.1|FL047846
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211334344|gb|FL047783.1|FL047783
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|22521047|gb|BU079858.1|BU079858
EST:     TGAATGGAACCACACTTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|22935511|gb|BU571786.1|BU571786
EST:     TGAATGGAACCACACTTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|71432523|gb|DR813573.1|DR813573
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211003003|gb|FL047945.1|FL047945
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211431391|gb|FL047881.1|FL047881
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211332183|gb|FL047773.1|FL047773
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211428782|gb|FL047859.1|FL047859
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211433984|gb|FL047888.1|FL047888
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211423582|gb|FL047836.1|FL047836
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|29130657|gb|CB381361.1|CB381361
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211426203|gb|FL047855.1|FL047855
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATG-AGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|31406074|gb|CD484806.1|CD484806
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211325686|gb|FL047734.1|FL047734
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|149074503|gb|EE162899.2|EE162899
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211436593|gb|FL047911.1|FL047911
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211436597|gb|FL047915.1|FL047915
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211431386|gb|FL047876.1|FL047876
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|20811062|gb|BQ295540.1|BQ295540
EST:     AATGGAACCACACCTTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: AATGGAACCACACC-TCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|22546283|gb|BU098594.1|BU098594
EST:     TGAATGGAACCACACTTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|9743085|gb|BE519233.1|BE519233
EST:     TGAATGGAACCACACTTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|29946731|gb|CB816297.1|CB816297
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|32865935|gb|CF005617.1|CF005617
EST:     TGAATGGAACCACACTTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|26559338|gb|CA831573.1|CA831573
EST:     TGAATGGAACCACACTTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211499529|gb|FL287332.1|FL287332
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCAT
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCAT
EST: gi|15545715|gb|BI643509.1|BI643509
EST:     TGAATGGAACCACACTTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211439183|gb|FL047921.1|FL047921
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211439189|gb|FL047927.1|FL047927
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211433992|gb|FL047896.1|FL047896
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|148951386|gb|EC897102.2|EC897102
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|29167990|gb|CB411250.1|CB411250
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211423579|gb|FL047833.1|FL047833
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|32908608|gb|CF013421.1|CF013421
EST:     TGAATGGAACCACACTTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211433993|gb|FL047897.1|FL047897
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211420975|gb|FL047814.1|FL047814
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|71438877|gb|DR819927.1|DR819927
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|31910284|gb|CD651346.1|CD651346
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211420980|gb|FL047819.1|FL047819
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|32864216|gb|CF003898.1|CF003898
EST:     TGAATGGAACCACACTTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|148963937|gb|EE015058.2|EE015058
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211002993|gb|FL047935.1|FL047935
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|31611756|gb|CD568378.1|CD568378
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211334357|gb|FL047796.1|FL047796
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211426205|gb|FL047857.1|FL047857
EST:     TGAATKGAACCACACCTCGGGAAAATTGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|19436441|gb|BM952851.1|BM952851
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|87151891|gb|DY396680.1|DY396680
EST:     GCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: GCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211428784|gb|FL047861.1|FL047861
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|18660890|gb|BM501102.1|BM501102
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|28909705|gb|CB331061.1|CB331061
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211330011|gb|FL047754.1|FL047754
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211433998|gb|FL047902.1|FL047902
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|22541975|gb|BU092413.1|BU092413
EST:     TGAATGGAACCACACTTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211330022|gb|FL047765.1|FL047765
EST:     TGAATCGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|21432285|gb|BQ547775.1|BQ547775
EST:     TGAATGGAACCACACTTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211426197|gb|FL047849.1|FL047849
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|32945103|gb|CF049922.1|CF049922
EST:     TGAATGGAACCACACTTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211327859|gb|FL047748.1|FL047748
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|60339239|gb|DN206212.1|DN206212
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211334356|gb|FL047795.1|FL047795
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211332188|gb|FL047778.1|FL047778
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|31558319|gb|CD527531.1|CD527531
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211431395|gb|FL047885.1|FL047885
EST:     GAATGGAACCACACCTCGGGAAAATGGAATTGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: GAATGGAACCACACCTCGGGAAAATGGAA-TGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211436585|gb|FL047903.1|FL047903
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211325688|gb|FL047736.1|FL047736
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211436594|gb|FL047912.1|FL047912
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211334349|gb|FL047788.1|FL047788
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211002997|gb|FL047939.1|FL047939
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATCGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211336514|gb|FL047807.1|FL047807
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|28931363|gb|CB334724.1|CB334724
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|21891719|gb|BQ744932.1|BQ744932
EST:     TGAATGGAACCACACTTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211420976|gb|FL047815.1|FL047815
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATG-AGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211327862|gb|FL047751.1|FL047751
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211433994|gb|FL047898.1|FL047898
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211428787|gb|FL047864.1|FL047864
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211420974|gb|FL047813.1|FL047813
EST:     TGAATGGAACCACACCTCGGGAAAATGGAAT-GAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211433987|gb|FL047891.1|FL047891
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|6827097|gb|AW330740.1|AW330740
EST:     TGAATGGAACCACACTTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211436588|gb|FL047906.1|FL047906
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211431385|gb|FL047875.1|FL047875
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|29543548|gb|CB603930.1|CB603930
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|148931876|gb|EC877340.2|EC877340
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|56691550|gb|CX129453.1|CX129453
EST:     TGAATGGAACCACACTTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|60339445|gb|DN206418.1|DN206418
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|22491264|gb|BU051187.1|BU051187
EST:     GCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: GCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|30306894|gb|CD001567.1|CD001567
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211330010|gb|FL047753.1|FL047753
EST:     TGAATGGAACCACACCTCGGGAAAATGGAAT-GAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211423584|gb|FL047838.1|FL047838
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211336508|gb|FL047801.1|FL047801
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|32912493|gb|CF017305.1|CF017305
EST:     TGAATGGAACCACACTTCGGGAAAATGGAATGGAGGTGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211428791|gb|FL047868.1|FL047868
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|148937047|gb|EC881220.2|EC881220
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|71442156|gb|DR823206.1|DR823206
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211439185|gb|FL047923.1|FL047923
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|21809965|gb|BQ668283.1|BQ668283
EST:     TGAATGGAACCACACTTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211334345|gb|FL047784.1|FL047784
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|22472399|gb|BU036879.1|BU036879
EST:     TGAATGGAACCACACTTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|87157487|gb|DY402276.1|DY402276
EST:     TGAATGGAACCACACTTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211428794|gb|FL047871.1|FL047871
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211336509|gb|FL047802.1|FL047802
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
EST: gi|211002998|gb|FL047940.1|FL047940
EST:     TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAG                         GTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC
genomic: TGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 42 (downstream exon)
Score: 1321

GAAAGTCGGTGGGTCAAGTCCGAGTGGAAGAAGGATGAGAACATGGCTGGTGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACCCTGAGTTCAGCAACAAGGATAAGACCCTGGTGCTGCAGTTCTCTGTGAA


Block sizes: 49 (upstream exon), 48 (downstream exon)
Score: 1009

GAAAGTCGGTGGGTCAAGTCCGAGTGGAAGAAGGATGAGAACATGGCTGGTGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACCCTGAGTTCAGCAACAAGGATAAGACCCTGGTGCTGCAGTTCTCTGTGAA


Block sizes: 49 (upstream exon), 42 (downstream exon)
Score: 1068

GAAAGTCGGTGGGTCAAGTCCGAGTGGAAGAAGGATGAGAACATGGCTGGTGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACCCTGAGTTCAGCAACAAGGATAAGACCCTGGTGCTGCAGTTCTCTGTGAA


Block sizes: 49 (upstream exon), 45 (downstream exon)
Score: 3511

GAAAGTCGGTGGGTCAAGTCCGAGTGGAAGAAGGATGAGAACATGGCTGGTGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattcca ... cttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACCCTGAGTTCAGCAACAAGGATAAGACCCTGGTGCTGCAGTTCTCTGTGAA


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GAAAGTCGGTGGGTCAAGTCCGAGTGGAAGAAGGATGAGAACATGGCTGGTGAATGGAACCACACCTCGGGAAAATGGAATGGAGATGCCGAGGACAAAGgtaaattccaaaacatcagaagattggtggtttcagtttatttatgagttactcaacacgtttcttgttgcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG