1 5' 3' | 2 5' 3' | 3 5' 3' |
GCCATGAGTTGTTTGCAGATGTTTCATTTCTTGTTTTCGTCAGTTCTTGGGTACTCCTCCGCCTTATATATTATCCGTTCTGGATTCTCTGGAGCACGAGgtaaagatgagtaactaatgcatgggtctgtatactttaggggctcggtattaataaaactatgcacttattcttaaatttcag
species | Zea mays |
transcript | GRMZM2G315726_T02 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GTACTCCTCCGCCTTATATATTATCCGTTCTGGATTCTCTGGAGCACGAG CTATGAAGTTGTTCTGACTCTAGACAAGGAAAAGCATAAAGTTGACGGGCCEST: gi|84969762|gb|DV170504.2|DV170504
genomic: GTACTCCTCCGCCTTATATATTATCCGTTCTGGATTCTCTGGAGCACGAGgtaaagatga ... taaatttcagCTATGAAGTTGTTCTGACTCTAGACAAGGAAAAGCATAAAGTTGACGGGCC
EST: GTACTCCTCCGCCTTATATATTATCCGTTCTGGATTCTCTGGAGCACGAG CTATGAAGTTGTTTTGACTCTAGACAAGGAAAAGCATAAAGTTGACGGGCC
genomic: GTACTCCTCCGCCTTATATATTATCCGTTCTGGATTCTCTGGAGCACGAGgtaaagatga ... taaatttcagCTATGAAGTTGTTCTGACTCTAGACAAGGAAAAGCATAAAGTTGACGGGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCATGAGTTGTTTGCAGATGTTTCATTTCTTGTTTTCGTCAGTTCTTGGGTACTCCTCCGCCTTATATATTATCCGTTCTGGATTCTCTGGAGCACGAGgtaaagatgagtaactaatgcatgggtctgtatactttaggggctcggtattaataaaactatgcacttattcttaaatttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA