1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GGAGGAGCCGCTAATCCAGGCCGCGGAGTGCCGCATATGCCAGGAGGAAGATAGCGTGAAGAACCTCGAGAAACCGTGTGCTTGCAGCGGCAGTCTCAAGgtttacaccctacttaattaaattactgcatgccattcttatctccacagagctttaagcttcacagttgttcatgaggtgtacctgcaattaaaatttt...
species | Zea mays |
transcript | GRMZM2G303431_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ATAGCGTGAAGAACCTCGAGAAACCGTGTGCTTGCAGCGGCAGTCTCAAG TATGCTCACAGAGCTTGCGTGCAACGCTGGTGCAACGAGAAAGGAGACACTEST: gi|109179339|gb|EC379935.1|EC379935
genomic: ATAGCGTGAAGAACCTCGAGAAACCGTGTGCTTGCAGCGGCAGTCTCAAGgtttacaccc ... tcatgtgcagTATGCTCACAGAGCTTGCGTGCAACGCTGGTGCAACGAGAAAGGAGACACT
EST: ATAGCATGAAGAACCTCCAGAAACCGTGTGCTTGCAGCGGCAGTCTCAAG TATGCTCACAGAGCTTGCGTGCAACGCTGGTGCAACGAGAAAGGAGACACTEST: gi|32858443|gb|CD998124.1|CD998124
genomic: ATAGCGTGAAGAACCTCGAGAAACCGTGTGCTTGCAGCGGCAGTCTCAAGgtttacaccc ... tcatgtgcagTATGCTCACAGAGCTTGCGTGCAACGCTGGTGCAACGAGAAAGGAGACACT
EST: ATAGCGTGAAGAACCTCGAGAAACCGTGTGCTTGCAGCGGCAGTCTCAAG TATGCTCACAGAGCTTGCGTGCAACGCTGGTGCAACGAGAAAGGAGACACTEST: gi|32919905|gb|CF024717.1|CF024717
genomic: ATAGCGTGAAGAACCTCGAGAAACCGTGTGCTTGCAGCGGCAGTCTCAAGgtttacaccc ... tcatgtgcagTATGCTCACAGAGCTTGCGTGCAACGCTGGTGCAACGAGAAAGGAGACACT
EST: ATAGCGTGAAGAACCTCGAGAAACCGTGTGCTTGCAGCGGCAGTCTCAAG TATGCTCACAGAGCTTGCGTGCAACGCTGGTGCAACGAGAAAGGAGACACT
genomic: ATAGCGTGAAGAACCTCGAGAAACCGTGTGCTTGCAGCGGCAGTCTCAAGgtttacaccc ... tcatgtgcagTATGCTCACAGAGCTTGCGTGCAACGCTGGTGCAACGAGAAAGGAGACACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAGGAGCCGCTAATCCAGGCCGCGGAGTGCCGCATATGCCAGGAGGAAGATAGCGTGAAGAACCTCGAGAAACCGTGTGCTTGCAGCGGCAGTCTCAAGgtttacaccctacttaattaaattactgcatgccattcttatctccacagagctttaagcttcacagttgttcatgaggtgtacctgcaattaaaatttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -caccctac