Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGTGGACCCCAAACAAACTCCAGGCTTGTTCTGAACTATGGTTTTGTTGATGAAAACAATCCCTTTGATCGCATATCAATTGAGgtagacattctttattatgcagcaatctcctttactgtgtggttggtgtaactgtttgaatcactgttacag

Basic information

species Zea mays
transcript GRMZM2G302195_T03
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G302195_T03 (Zea mays), 5'ss of exon 2
lower sequence: Vv14s0171g00310.t01 (Vitis vinifera), 5'ss of exon 7
GTGTGGACCCCAAACAAACTCCAGGCTTGTTCTGAACTATGGTTTTGTTGATGAAAACAATCCCTTTGATCGCATATCAATTGAGgtaga----------cattctttattatgcagcaatctcctttactgtgtggttggtgtaactgtttgaatcactgttacag--------------------
|||||| || ||  | ||||| |   |  ||||||| |||||||||||||||||| ||||| ||| |||||| |||    ||||||||             |  |||| |||| ||  | | | || |    | |  | |||| |    |     | | || || |                     
GTGTGGTCCACAGCCTAACTCAAAATTGCTTCTGAATTATGGTTTTGTTGATGAAGACAATTCCTATGATCGTATAGTGGTTGAGgtaatacttgagtcctacccttttttatacaaaattttactgtttgctcttttgggtgaactcttcctttttattgatataactttataatctctgtttcag